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The map label for this gene is trbC [C]

Identifier: 189184401

GI number: 189184401

Start: 1524010

End: 1524393

Strand: Reverse

Name: trbC [C]

Synonym: OTT_1494

Alternate gene names: 189184401

Gene position: 1524393-1524010 (Counterclockwise)

Preceding gene: 189184402

Following gene: 189184400

Centisome position: 75.88

GC content: 30.47

Gene sequence:

>384_bases
ATGGTTATACGAGTAATGATGTTGATGGTTTTATTATTTGTTAATAATGCTAATGCTTTTTTTTTGGACAAGCAAAAAAC
TTTTATTTTTGTCTCATTTTCAATGAGTGATGAGGCTTTAAAAAGCTATTTTGCTGAGTCTCAAAAGGCTGGAGCTCAAT
TAGTTATGCGTGGGTTAATTAATAACTCATTTACACAAACAAAGAATAAAACTATGGAGCTTGGTATTAGCTTCGATATA
GATCCTAGCTTGTTTGAACAATATAAAATTGATGTTGTACCTGTGATAGTAATAGATGATGAAAAAAGAGGATTAACCAA
GAAATTAACTGGCCATATTCCTTTAGCAATAGCATTAGAAATTATGGAGAACAATACTCCATGA

Upstream 100 bases:

>100_bases
GCTGGCAGAGAATTTCCAGTTAATGGTGAAGATTTTGGTTACTTGATTTGGCGAAAAAGAGATTGTTGTTTGCTTTGATT
TATAAAGCTTGGAGAGGAAT

Downstream 100 bases:

>100_bases
GATTATTTTCTATATTAACTTTAATAACGCTCAATATTAGCTGTTGTTTAGCTTCAATGCAGAATGACTATAATGAAGCT
AAAAACTATAATGTAAATCT

Product: putative conjugative transfer protein TrbC

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLVMRGLINNSFTQTKNKTMELGISFDI
DPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMENNTP

Sequences:

>Translated_127_residues
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLVMRGLINNSFTQTKNKTMELGISFDI
DPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMENNTP
>Mature_127_residues
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLVMRGLINNSFTQTKNKTMELGISFDI
DPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMENNTP

Specific function: Essential For F Plasmid Conjugative Transfer, Participates In F-Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14370; Mature: 14370

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLVMRGLI
CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
NNSFTQTKNKTMELGISFDIDPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALE
CCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEEEEEECCCCCCCHHHHCCCCCCEEEEE
IMENNTP
EECCCCC
>Mature Secondary Structure
MVIRVMMLMVLLFVNNANAFFLDKQKTFIFVSFSMSDEALKSYFAESQKAGAQLVMRGLI
CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
NNSFTQTKNKTMELGISFDIDPSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALE
CCCCCCCCCCEEEEEEEECCCHHHHHHCCEEEEEEEEECCCCCCCHHHHCCCCCCEEEEE
IMENNTP
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA