Click here to switch to the map view.

The map label for this gene is 189184400

Identifier: 189184400

GI number: 189184400

Start: 1523246

End: 1524013

Strand: Reverse

Name: 189184400

Synonym: OTT_1493

Alternate gene names: NA

Gene position: 1524013-1523246 (Counterclockwise)

Preceding gene: 189184401

Following gene: 189184399

Centisome position: 75.86

GC content: 31.77

Gene sequence:

>768_bases
ATGAGATTATTTTCTATATTAACTTTAATAACGCTCAATATTAGCTGTTGTTTAGCTTCAATGCAGAATGACTATAATGA
AGCTAAAAACTATAATGTAAATCTTGGAAATTCTTCAAATACACAAGAATTATTTCATCAAGGTAGTAATGTCAATTATC
CTAATAATGATGAAGATTTAACCTATCATGGCCGTAATCAGCTTGGTACAGAAAGTGGGGCAATGTTATTTCAAGCTGAA
AACAGTAAAAACAATGCCTTAACTCAACATAATATCAACGATCAAAATTATATGATAGCTAATTCAATGAGAATTGAATC
TGATCCTTTAAGTGCCCTTGATAGCAGTAACTTCGTAACTCAGACAAGTACAACTAATACTGAAATTATTCAAAGTTGTA
CTGAAGGCAGTAATTTTAACATTGAACTTATTCGAGAATTAAATGTTGAGTGCAGATTAGATAATGTATGGCTTCCATGG
CAAAACCGGCAAATGGAATTTGCAACAGAAAAAATAAAGGAGAATCATAGTAATTGGCTTAAGAGTCGTAGCGATGTCTA
TGATGAATCAGGTGCACAAATATACTGCCTAGCAGATGATCCCGAAGCAATTGTAAAACAAATGAGCAATGCTATTGCTA
ATAGGCTTCGTGTACCTATAGAGCATATTGGTATACATTTTACACAAACTTTCATAAATGAAAAATATATACTTGGATAT
GAATATAGAGATAAGACTCAAGAACTAAGGGAAGTAGCAGAATATTAG

Upstream 100 bases:

>100_bases
CTGTGATAGTAATAGATGATGAAAAAAGAGGATTAACCAAGAAATTAACTGGCCATATTCCTTTAGCAATAGCATTAGAA
ATTATGGAGAACAATACTCC

Downstream 100 bases:

>100_bases
CAAGTTGTAAACCCTGAACTTGAGCAATTAACAGAAAGTAATAAATGCTATGAGGTTAATAGAATTAACTATGAGAGTGG
TGATAGAGTATTTTTTGACA

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: Truncated Conjugative Transfer Protein TraN

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRLFSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLPW
QNRQMEFATEKIKENHSNWLKSRSDVYDESGAQIYCLADDPEAIVKQMSNAIANRLRVPIEHIGIHFTQTFINEKYILGY
EYRDKTQELREVAEY

Sequences:

>Translated_255_residues
MRLFSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLPW
QNRQMEFATEKIKENHSNWLKSRSDVYDESGAQIYCLADDPEAIVKQMSNAIANRLRVPIEHIGIHFTQTFINEKYILGY
EYRDKTQELREVAEY
>Mature_255_residues
MRLFSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLPW
QNRQMEFATEKIKENHSNWLKSRSDVYDESGAQIYCLADDPEAIVKQMSNAIANRLRVPIEHIGIHFTQTFINEKYILGY
EYRDKTQELREVAEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29317; Mature: 29317

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCEEECCCCHHHHCCCCCEE
QTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLPWQNRQMEFATEKIKENHSNWL
ECCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHH
KSRSDVYDESGAQIYCLADDPEAIVKQMSNAIANRLRVPIEHIGIHFTQTFINEKYILGY
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE
EYRDKTQELREVAEY
EHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLFSILTLITLNISCCLASMQNDYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEEEECCEEECCCCHHHHCCCCCEE
QTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLPWQNRQMEFATEKIKENHSNWL
ECCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHH
KSRSDVYDESGAQIYCLADDPEAIVKQMSNAIANRLRVPIEHIGIHFTQTFINEKYILGY
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE
EYRDKTQELREVAEY
EHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA