| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184353
Identifier: 189184353
GI number: 189184353
Start: 1479068
End: 1480066
Strand: Reverse
Name: 189184353
Synonym: OTT_1446
Alternate gene names: NA
Gene position: 1480066-1479068 (Counterclockwise)
Preceding gene: 189184354
Following gene: 189184351
Centisome position: 73.67
GC content: 31.03
Gene sequence:
>999_bases ATGCATTTATCAAGATTTTTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT ACTAATACATTTTCTGAACGATATATTGTTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGAACGATAT TAGATGCAGACATAGCGTCTAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGTGCGCAATATATAATA GAAATGCAAGTAGATCCTACACAAGGATTTGAAAAAAGAGCCCAGTATTATGCAGCAAAGGCATATGGCAGGCAACCAAA TAGAGGAAAAGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAACA AAGAAGACTATATATCAAGGCATGTAATATTGGATAAAAAGACATATGAGCATGATCTAAAAGACTTTTCATTTACCTTT ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAGTTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA TGCAAAAGAAACAACATTAGATGGATATAATAAAATAATAGGTGAAGATTTAATAATAAAGAGAGCGTATGAGGCATTAG ATCAGTTTAATTGGAGTGAAGACGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTCGAA GATTATAAACTCGAACGCGCTAAAGCTGAAGGTAAAGCTGAAGGCATAAAGCTCGGTGAAGCTAAAGGTAAAGCTGAAGG TAAAGCTGAAGGTAAAGCTGAAGGTAAAGCCGAAGGTAAAGCTGAAGGCATAAAGCTCGGTGAAGCTAAAGGTAAAGCTG AAGCAAAAAAAGATTTTGCAATAAAATTATTGAAATCTGAATTATCAGTTGAGACAATTGCTGAATATACGGATTTATCA ATACAAGAAGTATTAAATTTAAAAAATAGCGTAAAATAA
Upstream 100 bases:
>100_bases GTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTATTGTATAATTTAAAAAGA ATAGAAAATATGAAAAATAT
Downstream 100 bases:
>100_bases TAAGAAATATACAACATACAAAATTTTACCTTTAATGTGTTGTATGCTATTTCTATTAAATCATATAAATGCCTTATATC ACACTACAAGTTCTAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEGKAEGIKLGEAKGKAEAKKDFAIKLLKSELSVETIAEYTDLS IQEVLNLKNSVK
Sequences:
>Translated_332_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEGKAEGIKLGEAKGKAEAKKDFAIKLLKSELSVETIAEYTDLS IQEVLNLKNSVK >Mature_332_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEGKAEGIKLGEAKGKAEAKKDFAIKLLKSELSVETIAEYTDLS IQEVLNLKNSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38123; Mature: 38123
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEGKAEGIKLGEAKGKAEAKKDFA HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH IKLLKSELSVETIAEYTDLSIQEVLNLKNSVK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHEEECCEECCCCHHHHHHHEEECCHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGIKLGEAKGKAEGKAEGKAEGKAEGKAEGIKLGEAKGKAEAKKDFA HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH IKLLKSELSVETIAEYTDLSIQEVLNLKNSVK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA