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The map label for this gene is traA [H]

Identifier: 189184351

GI number: 189184351

Start: 1475436

End: 1478240

Strand: Reverse

Name: traA [H]

Synonym: OTT_1444

Alternate gene names: 189184351

Gene position: 1478240-1475436 (Counterclockwise)

Preceding gene: 189184353

Following gene: 189184350

Centisome position: 73.58

GC content: 33.4

Gene sequence:

>2805_bases
ATGGCTATACAGTTTACAAGGATTGAATTTTTAACTAGAAGTAAAGGAGGTGATAGTTGTCGTAAGGCAGCGTATAATGC
AAGAACTATTGTTAAAAACGAGAATACAGGTATAAAGTATAACTTCTCTCGTAAGAAAGATAACGTATATCATACAGTGC
TGATACCGGATTATGTAAAACAAGAATTCAAGAATATTCAAACATTAATGAATGAGGTAGAACGAACCGCAAAAAACCAA
AAAAACAGCCAGTTGTTGAAGGATATCGTAATAGCGTTGCCAGATGATAAGGAGCTAAATTTAGAGCATAGAATAGAACT
AACTCATCAAATAGTTGATGCAATGGAATGGGTGCAAAATGGTCTTGGAGTACAGATAGACATTCATAAGCCTCAAACAG
GAGATAAAAACTGGCATACACATATATTGCTTACTATGAGAAGATTTAGAGAAGATGGAACTGGTTTAGGAGATATAGCA
GTAGATTTAAACCCAAAAATCATAACAGTTAATGGCAAAAAGGTTGTTATTAAAGATTCTAAGATGATTCATGAAATAGC
AAAAGAAGAAACTAATGCATATTTCGCTGAATTAGGCTTACCATATAGAGTTGACGAGACAAGCGAAGTACCTGGAAAGC
ATATTGGACCTCGTAGAATTAGGAATTTAATTAATGAAGTATTAAATGAAAATGAGTTACGTAAAGAGGCTCATTTGAAG
ATTATTAATGATGCTGACGTAATAACAGATTCTATAACACATTACAAATCTATTTTTACTAAGCAGGATGTTGAAAAAGC
AGTAAAAGATATACCAGATCCAACAGCAAGAGAACAGTTAGTTCAGCAAGTGCTTAGTTCAAATAGAATACTAGAGTTAT
ACCATGATGATGGTGAAAGTAGCAAATATTTTACGACAATTGAGGTTCGAAATGAGGAGACGAGAATAATCAGAATAGCT
AATAAAATCAATGATCAGGTTTATTACAACGATATTTACAATCTTAAAAGTGATATCGAAGGTCTAGCAAATGTTAGTGA
AGAACAGAAACAAGCTCTAAGGCATATTTTGCTTAGCACTAGTGGAGTTAGAGTCTTAAGAGGAAGAGCTGGTACAGGAA
AATCTTATGTTTTAATAAAAGCGCATAAGCTCGCAACAAATCGTGGACAAAAAGTTATTGGTCTTGCTCCTACTCATAAG
GCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACAGTAAAAGGATTTTTGTATAATCGAAAAAAAAATTT
TATGCAAGGCAGCTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATGCAGAGCTGTTTAGAGTAGTTA
GAAACAATAATTGTCAACTGATACTTGCTGGAGATGAAAAGCAGTTAGCTTCAATAGAAAGAGGTGGAATGTTTGAGATG
CTGAGTAATATTTTTGGTTCACATGTTTTAGTAAATATTCGAAGACAAAGTAAAAACTGGAGCAGAGAAGCAGCAACAAA
GTTTGCTGAGAGTAATATTTTAAGCTGTATAACCTTACTGAGGCAAAATAAATGCGTTAAGTTTGATAATACGTTGCAGG
ACTCAATGAGTAAGTTAATATACAACTGGAGTCTAAGCAAGTTTAAGCTACATGAAAAATTGGTAATTACAGTACGTAAT
AAAGATGTCGACATTCTTAATTCAAGTATTAGGTCTTTGTTAAAAGCAAATGGTACGCTACAAGGCAAAGAATATAGGCG
TTCAATTGCTGAAAGGAAAGAGTCATATATGGCAGGAGATAGAATCGTATTTCAAAAAAGCTATAAGGATTTACAAATAC
AAAATAGTGAATTTGCAACTTTAACTTCGGTTAGTAAAAATAAATTTATAGCTAAGACAGACACAAGAAAAGAAGTGAGT
TTTGATCCTAGTGAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGCTCAGGGAGCTTCTATAAAAGATGT
ATACGTTTTGCATAATGGAATAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAGAGAACTTGCAGTTAT
ATTGCAATAAGGAAGCTACTGGAAGCATTAACAGCTTAATAAATCAGCTCAGCAGACCAAATGAGAAATCAGCTAGCATA
ACTCTGAAAACTGCTCATGATTTGGAGAAAGAACGGACAAAGACAACTGTTTTTAGTAAAATCGAAAACTGGTTTAAGTC
TATAATCAATGATATCAATGATAGATCTCATGTAAATGAAGAATATTATCATTTTACCGCTAAACCAGAGCAAGAAGCTA
AAGTAGAAAAAGTCCAGCTCAAAGATATTTCTACTCCATTATTTATGCACATCAAAGAACAAAGACAATATGATTATGAT
GTAACCATTCTGTCAGCAGAAGGAAAAACGATATCAAGTTTTCAGAAGGCTGGCATTGATAGCAGAATGGTATATAGCTC
AAATGTAAATAATTTGAAGTACTATCAACCATTTCAAGGAGAAAAGATTCTTATAGCTGCAAATAATGATAAACATAATA
AAGAGTATGCAAGTACTATAAACGAGGCTGCAAAAGCATTAAAAAGCAAAGGAGCAATCACTAGCATCGTAGTTCCTTCA
GAAGGTGAAGATTTTAACGAAATGCTAAAAAATAAAGGAGCAATAGCTGTTAAGGAGCTTATGATACCTGAAATCATGAA
GTTAATTAATACTCAGAACGTAAAAACAGAGTCTGAACAAGTGGTGAAAACTGACATAGCTCCAAAAATTGGAGTTAGAC
GGTAG

Upstream 100 bases:

>100_bases
GAGTACTCATTAACCGATTGAGTGTTAAAAAAAGCAGTTTGTACTGGCAAAATCAAAAAAACCATGCTAACTTAAAACTC
AGGTGAGAATTGGTATTGAG

Downstream 100 bases:

>100_bases
TGCTGAAGATTAAAAATTTACTACCATATTACCTTTTTGGTATTGTAATGCAATTTAAGTTCACTGAATTTATTTCTCAT
ATTATGAGTTATAATATGTA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 934; Mature: 933

Protein sequence:

>934_residues
MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNENTGIKYNFSRKKDNVYHTVLIPDYVKQEFKNIQTLMNEVERTAKNQ
KNSQLLKDIVIALPDDKELNLEHRIELTHQIVDAMEWVQNGLGVQIDIHKPQTGDKNWHTHILLTMRRFREDGTGLGDIA
VDLNPKIITVNGKKVVIKDSKMIHEIAKEETNAYFAELGLPYRVDETSEVPGKHIGPRRIRNLINEVLNENELRKEAHLK
IINDADVITDSITHYKSIFTKQDVEKAVKDIPDPTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIA
NKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHK
AVSELRSKGYTEVYTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEM
LSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVKFDNTLQDSMSKLIYNWSLSKFKLHEKLVITVRN
KDVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTRKEVS
FDPSEIQFKHGYASTVYKAQGASIKDVYVLHNGISNISSSYVAMTRHIENLQLYCNKEATGSINSLINQLSRPNEKSASI
TLKTAHDLEKERTKTTVFSKIENWFKSIINDINDRSHVNEEYYHFTAKPEQEAKVEKVQLKDISTPLFMHIKEQRQYDYD
VTILSAEGKTISSFQKAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANNDKHNKEYASTINEAAKALKSKGAITSIVVPS
EGEDFNEMLKNKGAIAVKELMIPEIMKLINTQNVKTESEQVVKTDIAPKIGVRR

Sequences:

>Translated_934_residues
MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNENTGIKYNFSRKKDNVYHTVLIPDYVKQEFKNIQTLMNEVERTAKNQ
KNSQLLKDIVIALPDDKELNLEHRIELTHQIVDAMEWVQNGLGVQIDIHKPQTGDKNWHTHILLTMRRFREDGTGLGDIA
VDLNPKIITVNGKKVVIKDSKMIHEIAKEETNAYFAELGLPYRVDETSEVPGKHIGPRRIRNLINEVLNENELRKEAHLK
IINDADVITDSITHYKSIFTKQDVEKAVKDIPDPTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIA
NKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHK
AVSELRSKGYTEVYTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEM
LSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVKFDNTLQDSMSKLIYNWSLSKFKLHEKLVITVRN
KDVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTRKEVS
FDPSEIQFKHGYASTVYKAQGASIKDVYVLHNGISNISSSYVAMTRHIENLQLYCNKEATGSINSLINQLSRPNEKSASI
TLKTAHDLEKERTKTTVFSKIENWFKSIINDINDRSHVNEEYYHFTAKPEQEAKVEKVQLKDISTPLFMHIKEQRQYDYD
VTILSAEGKTISSFQKAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANNDKHNKEYASTINEAAKALKSKGAITSIVVPS
EGEDFNEMLKNKGAIAVKELMIPEIMKLINTQNVKTESEQVVKTDIAPKIGVRR
>Mature_933_residues
AIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNENTGIKYNFSRKKDNVYHTVLIPDYVKQEFKNIQTLMNEVERTAKNQK
NSQLLKDIVIALPDDKELNLEHRIELTHQIVDAMEWVQNGLGVQIDIHKPQTGDKNWHTHILLTMRRFREDGTGLGDIAV
DLNPKIITVNGKKVVIKDSKMIHEIAKEETNAYFAELGLPYRVDETSEVPGKHIGPRRIRNLINEVLNENELRKEAHLKI
INDADVITDSITHYKSIFTKQDVEKAVKDIPDPTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIAN
KINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKA
VSELRSKGYTEVYTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEML
SNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVKFDNTLQDSMSKLIYNWSLSKFKLHEKLVITVRNK
DVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTRKEVSF
DPSEIQFKHGYASTVYKAQGASIKDVYVLHNGISNISSSYVAMTRHIENLQLYCNKEATGSINSLINQLSRPNEKSASIT
LKTAHDLEKERTKTTVFSKIENWFKSIINDINDRSHVNEEYYHFTAKPEQEAKVEKVQLKDISTPLFMHIKEQRQYDYDV
TILSAEGKTISSFQKAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANNDKHNKEYASTINEAAKALKSKGAITSIVVPSE
GEDFNEMLKNKGAIAVKELMIPEIMKLINTQNVKTESEQVVKTDIAPKIGVRR

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 106411; Mature: 106280

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNENTGIKYNFSRKKDNVYHTVLIPDYVK
CCEEEEEHHHHHCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCCEEEEEECCHHHH
QEFKNIQTLMNEVERTAKNQKNSQLLKDIVIALPDDKELNLEHRIELTHQIVDAMEWVQN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLGVQIDIHKPQTGDKNWHTHILLTMRRFREDGTGLGDIAVDLNPKIITVNGKKVVIKDS
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCEEEEECH
KMIHEIAKEETNAYFAELGLPYRVDETSEVPGKHIGPRRIRNLINEVLNENELRKEAHLK
HHHHHHHHHHHCHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCEE
IINDADVITDSITHYKSIFTKQDVEKAVKDIPDPTAREQLVQQVLSSNRILELYHDDGES
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
SKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLST
CEEEEEEEEECCCCEEEEEEHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
SGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFL
CCCEEEECCCCCCCEEEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEHHH
YNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEM
HHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHH
LSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVKFDNTLQDSMSKLI
HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
YNWSLSKFKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYMAGD
HHCCCHHEEECEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
RIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTRKEVSFDPSEIQFKHGYASTVYKAQ
EEEEEECCCCCEECCCCCEEEEECCCCCEEEECCCCCCCCCCHHHEEEECCCHHHEEECC
GASIKDVYVLHNGISNISSSYVAMTRHIENLQLYCNKEATGSINSLINQLSRPNEKSASI
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCCEE
TLKTAHDLEKERTKTTVFSKIENWFKSIINDINDRSHVNEEYYHFTAKPEQEAKVEKVQL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHEEEECCCCHHHHHHHHHH
KDISTPLFMHIKEQRQYDYDVTILSAEGKTISSFQKAGIDSRMVYSSNVNNLKYYQPFQG
HHCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCCC
EKILIAANNDKHNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCHHHHHH
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGVRR
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNENTGIKYNFSRKKDNVYHTVLIPDYVK
CEEEEEHHHHHCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCCEEEEEECCHHHH
QEFKNIQTLMNEVERTAKNQKNSQLLKDIVIALPDDKELNLEHRIELTHQIVDAMEWVQN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLGVQIDIHKPQTGDKNWHTHILLTMRRFREDGTGLGDIAVDLNPKIITVNGKKVVIKDS
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCEEEEECH
KMIHEIAKEETNAYFAELGLPYRVDETSEVPGKHIGPRRIRNLINEVLNENELRKEAHLK
HHHHHHHHHHHCHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCEE
IINDADVITDSITHYKSIFTKQDVEKAVKDIPDPTAREQLVQQVLSSNRILELYHDDGES
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
SKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLST
CEEEEEEEEECCCCEEEEEEHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
SGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFL
CCCEEEECCCCCCCEEEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEHHH
YNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEM
HHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHH
LSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVKFDNTLQDSMSKLI
HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
YNWSLSKFKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYMAGD
HHCCCHHEEECEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
RIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTRKEVSFDPSEIQFKHGYASTVYKAQ
EEEEEECCCCCEECCCCCEEEEECCCCCEEEECCCCCCCCCCHHHEEEECCCHHHEEECC
GASIKDVYVLHNGISNISSSYVAMTRHIENLQLYCNKEATGSINSLINQLSRPNEKSASI
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCCEE
TLKTAHDLEKERTKTTVFSKIENWFKSIINDINDRSHVNEEYYHFTAKPEQEAKVEKVQL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHEEEECCCCHHHHHHHHHH
KDISTPLFMHIKEQRQYDYDVTILSAEGKTISSFQKAGIDSRMVYSSNVNNLKYYQPFQG
HHCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCCC
EKILIAANNDKHNKEYASTINEAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCHHHHHH
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGVRR
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]