| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184325
Identifier: 189184325
GI number: 189184325
Start: 1453976
End: 1454416
Strand: Reverse
Name: 189184325
Synonym: OTT_1418
Alternate gene names: NA
Gene position: 1454416-1453976 (Counterclockwise)
Preceding gene: 189184326
Following gene: 189184324
Centisome position: 72.4
GC content: 28.12
Gene sequence:
>441_bases ATGGCAAGAAGATACAGTTATGATTTAAGAATGAAGATATTCAAAGCACTAGATGAGGGAGTATCAATTGTTAAAGCATG TAAAATATTCAATATAAGTCGTAATACGATATATAGATGGAAACATCTTAAATGGGAAACAGGAGATATTAAAGCAAAAC CTTATGGCCCAGCCAAAGGTTATAATGGGAAAATAGATCTCAAAGAATTTGAGGAGTTAATTATCAATCATCATGATAAA ACAGCTAAAGAATTAAGTATTATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATA CACTTATAAAAAAACTCATTTTCATTCCAAAAGGGATATTGTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTT CTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATATAG
Upstream 100 bases:
>100_bases ATCGTAAAGGAGAGATATAGCACGAACGTAGGAAATAGGTACATAATATGATAATATGAAAAGAGTATAAAAAAAAAAAA AAAAAAAAAATAGATAAATA
Downstream 100 bases:
>100_bases GATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCAG GGTTAGTATGATAGCAGGGC
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKGYNGKIDLKEFEELIINHHDK TAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDIVLRNEFIEKVKQISKENLVFIDESGI
Sequences:
>Translated_146_residues MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKGYNGKIDLKEFEELIINHHDK TAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDIVLRNEFIEKVKQISKENLVFIDESGI >Mature_145_residues ARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKGYNGKIDLKEFEELIINHHDKT AKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDIVLRNEFIEKVKQISKENLVFIDESGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17412; Mature: 17280
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEECCCCEECCCCCCCCC YNGKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDI CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC VLRNEFIEKVKQISKENLVFIDESGI HHHHHHHHHHHHHCCCCEEEEECCCC >Mature Secondary Structure ARRYSYDLRMKIFKALDEGVSIVKACKIFNISRNTIYRWKHLKWETGDIKAKPYGPAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEECCCCEECCCCCCCCC YNGKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKTHFHSKRDI CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCC VLRNEFIEKVKQISKENLVFIDESGI HHHHHHHHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA