| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189184326
Identifier: 189184326
GI number: 189184326
Start: 1454740
End: 1454976
Strand: Reverse
Name: 189184326
Synonym: OTT_1419
Alternate gene names: NA
Gene position: 1454976-1454740 (Counterclockwise)
Preceding gene: 189184327
Following gene: 189184325
Centisome position: 72.42
GC content: 28.27
Gene sequence:
>237_bases ATGAGTATTAGAGTTTTGAGATTTATCATATGGATTATTGCTTTAGTCAAGTTTAGTAATATATATGCAGTAGAATATGA GTTAGAAGCTGACAATTTACTAAAGCTTGAGATTTATGATAGTAGGCCAACAAGAATTAATCTTAAAGATGAAAAAATTA ATGATATTTTTATGTACCATCAAAATGTAGCTGAAGTTGTAGTTCATGAGTCCGGATTTTTGTTTATTGCTCCATGA
Upstream 100 bases:
>100_bases TTAAACATATAGCTGTCGATAAGACTTACTTTCTGACTTACAAGCGAACTCCTAATTACCTTTTATTGTTGACTGGTGTT AAAGAGAATGGAATAAAAAA
Downstream 100 bases:
>100_bases GAAGAAGAAAACAAGCTTTATTTAACTGTAATAGGAGAATACAAAACAATTCAAGATTTAATGTTAACTTTTACTTCAAA CTCCAAACCCTGTAATGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSIRVLRFIIWIIALVKFSNIYAVEYELEADNLLKLEIYDSRPTRINLKDEKINDIFMYHQNVAEVVVHESGFLFIAP
Sequences:
>Translated_78_residues MSIRVLRFIIWIIALVKFSNIYAVEYELEADNLLKLEIYDSRPTRINLKDEKINDIFMYHQNVAEVVVHESGFLFIAP >Mature_77_residues SIRVLRFIIWIIALVKFSNIYAVEYELEADNLLKLEIYDSRPTRINLKDEKINDIFMYHQNVAEVVVHESGFLFIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9230; Mature: 9099
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRVLRFIIWIIALVKFSNIYAVEYELEADNLLKLEIYDSRPTRINLKDEKINDIFMYH CCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCCCEEEEEC QNVAEVVVHESGFLFIAP CCCEEEEEECCCEEEEEC >Mature Secondary Structure SIRVLRFIIWIIALVKFSNIYAVEYELEADNLLKLEIYDSRPTRINLKDEKINDIFMYH CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCCCEEEEEC QNVAEVVVHESGFLFIAP CCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA