| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183595
Identifier: 189183595
GI number: 189183595
Start: 714645
End: 714773
Strand: Direct
Name: 189183595
Synonym: OTT_0688
Alternate gene names: NA
Gene position: 714645-714773 (Clockwise)
Preceding gene: 189183594
Following gene: 189183596
Centisome position: 35.57
GC content: 28.68
Gene sequence:
>129_bases GTGAATGAAAACGTTATTGGTATGCTAAAACGGTTCAAAATTATTGCTGACAAATATCGAAATAGACGTAAAAGATTCTC TCTTAGATTTAATTTGATCTCTGGCATTTATAATTTTGAACTACCTTAA
Upstream 100 bases:
>100_bases AATTCACAATAATTCTGAATTACCAAAGAAAAAAAGCAAGAAAAATCCTTTAACTAAAAATGATAAAAAGAATAATCGTA GGTTAGCAGGAGCAAGAGTT
Downstream 100 bases:
>100_bases CCAGTTTCGAAAGAGATCTATTACAACCTAAACAGGCATTTATAATGAATAGCAAAGTAGTAGATATTATGTTAATATCT TGATAAATCTTTTTGGAGAA
Product: transposase
Products: NA
Alternate protein names: ISRin1 Transposase OrfB
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MNENVIGMLKRFKIIADKYRNRRKRFSLRFNLISGIYNFELP
Sequences:
>Translated_42_residues MNENVIGMLKRFKIIADKYRNRRKRFSLRFNLISGIYNFELP >Mature_42_residues MNENVIGMLKRFKIIADKYRNRRKRFSLRFNLISGIYNFELP
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5163; Mature: 5163
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENVIGMLKRFKIIADKYRNRRKRFSLRFNLISGIYNFELP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCC >Mature Secondary Structure MNENVIGMLKRFKIIADKYRNRRKRFSLRFNLISGIYNFELP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA