| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183553
Identifier: 189183553
GI number: 189183553
Start: 679142
End: 679471
Strand: Direct
Name: 189183553
Synonym: OTT_0646
Alternate gene names: NA
Gene position: 679142-679471 (Clockwise)
Preceding gene: 189183552
Following gene: 189183554
Centisome position: 33.81
GC content: 31.21
Gene sequence:
>330_bases ATGAAGTTTTTATTATTGCTATTGGGCTGTATGAGCCTAACCAGCTTCTTTTTTGAAAGTAATTTTGATTGTAAAATTCC TAAAGGGCAAAAATGTAAGTCTTTATACGAAATAAAGAATATGGTTGCTCAAGGCGCTTTTGATATTGATAATCTTGAGA AAGTTGAAACATCAAAAACTAAATCAAAAAGACGTTGTATTCTATGCTACAGGCAAGCTAAAGCAGTTCAAGGCGTAGAT GTTGTTAACAAGTCGCCGAAAAAACCAAAAAAATATCTTATTAATTTATTTAAATCAAAACAGAGTCAAGGTGAACGCAA GCATACATAA
Upstream 100 bases:
>100_bases AGAAGCCACATAATTTAACTTATTCAGCATCAACTAGCCATGAAAAAGTTAATTTGCATAATAAATTCGATCAATCACAA AAGTTAGAGGAGCATTTATA
Downstream 100 bases:
>100_bases GGATTTTGATCGAGAAAGATTTTCTAAACACTTTGTCTATGAATCATATGATGATGAGACTCAGCTATTCTTTAATCGTG GTTCAATAGGCTTTGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKFLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKNMVAQGAFDIDNLEKVETSKTKSKRRCILCYRQAKAVQGVD VVNKSPKKPKKYLINLFKSKQSQGERKHT
Sequences:
>Translated_109_residues MKFLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKNMVAQGAFDIDNLEKVETSKTKSKRRCILCYRQAKAVQGVD VVNKSPKKPKKYLINLFKSKQSQGERKHT >Mature_109_residues MKFLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKNMVAQGAFDIDNLEKVETSKTKSKRRCILCYRQAKAVQGVD VVNKSPKKPKKYLINLFKSKQSQGERKHT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12544; Mature: 12544
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKNMVAQGAFDIDNLEKVETSKT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KSKRRCILCYRQAKAVQGVDVVNKSPKKPKKYLINLFKSKQSQGERKHT HHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKFLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKNMVAQGAFDIDNLEKVETSKT CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KSKRRCILCYRQAKAVQGVDVVNKSPKKPKKYLINLFKSKQSQGERKHT HHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA