Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183552

Identifier: 189183552

GI number: 189183552

Start: 678960

End: 679142

Strand: Direct

Name: 189183552

Synonym: OTT_0645

Alternate gene names: NA

Gene position: 678960-679142 (Clockwise)

Preceding gene: 189183551

Following gene: 189183553

Centisome position: 33.8

GC content: 33.88

Gene sequence:

>183_bases
ATGAGCCCAGTCGTTCTTATTGCGTCAGGTAGAGTCATCGATGTTGTATTTAAAAAAGGTTTTGACTTACGTGAGCACAA
GAAGAAGCCACATAATTTAACTTATTCAGCATCAACTAGCCATGAAAAAGTTAATTTGCATAATAAATTCGATCAATCAC
AAAAGTTAGAGGAGCATTTATAA

Upstream 100 bases:

>100_bases
CTTCTCCAAATGAGGTAGAAAGGCAAATAGCAGACATGAAGCTGGAGCTAGCAATGCTTTTGATAAGCTAGCTGATTTTG
CTATAAAACGAGCTGATTCT

Downstream 100 bases:

>100_bases
TGAAGTTTTTATTATTGCTATTGGGCTGTATGAGCCTAACCAGCTTCTTTTTTGAAAGTAATTTTGATTGTAAAATTCCT
AAAGGGCAAAAATGTAAGTC

Product: putative conjugative transfer protein TraB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSASTSHEKVNLHNKFDQSQKLEEHL

Sequences:

>Translated_60_residues
MSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSASTSHEKVNLHNKFDQSQKLEEHL
>Mature_59_residues
SPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSASTSHEKVNLHNKFDQSQKLEEHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6913; Mature: 6782

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSASTSHEKVNLHNKFDQSQKLEEHL
CCCEEEEECCCEEEEEECCCCCCHHHCCCCCCEEEECCCCCCEEECCCCCCCHHHHHHCC
>Mature Secondary Structure 
SPVVLIASGRVIDVVFKKGFDLREHKKKPHNLTYSASTSHEKVNLHNKFDQSQKLEEHL
CCEEEEECCCEEEEEECCCCCCHHHCCCCCCEEEECCCCCCEEECCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA