| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183537
Identifier: 189183537
GI number: 189183537
Start: 657783
End: 659261
Strand: Direct
Name: 189183537
Synonym: OTT_0630
Alternate gene names: NA
Gene position: 657783-659261 (Clockwise)
Preceding gene: 189183536
Following gene: 189183538
Centisome position: 32.74
GC content: 31.58
Gene sequence:
>1479_bases ATGAAAAAGAAAATAACTGTTGTTATTATAGTATTAGTAGCTTTAATAACTGTTAATTTTGCTGCTGATGGATGCGGAGA AAAGTTTATGGTATTATCTAATTTTGAATTAGCAGCAAGTAGGCTAGGGTTTAATGGTTACAACACGTCAAACTTAACAG TAAGTGCAACAGAACATCAAGAAGCTCTGTTGAATGTACTACAAATAGCTGGTTATTTTCATTCAGAACAATTGTGGCAA GCTATTAATGCTTTGAAAGTCAAAGATCCTGTGGCAACTTTTAAGCAGATATATTCTGTTGTAAAAGCGTCTGGAGCTAA TCAAGATGATCCTAGTAAGTTTGACGCTAAAATATTACGTAAAAATTTTGGAGAAGGCACAGAGTTAGATGTACAAGATA TTATGGACTTAATTCTTTATTTAGCCCAATATGCTTTTAATAGGAAATTTGGTCAAGAACGTGATGAAGTAGTTGTGCAG AATTGGATGACAAAGTATAAAGATGAGTATTTGAAAGAAGCCGAAATTTTACAACTCATAGATCGCGAGATTCCAAAATA TAAGAATTATGATGTAGCTTGGATTGCTGGTGCATCTCGCTTCAATATGATAACACGTATCATAGACTACTACTATGCAA TATCAAAGTATAATATTAAAATCAATAGTAATGTAGCAGTATTAACAGGAGATCGCGAATTGTGGGCTAATATTGATGGT GTTGTACCTACAGTTTTGGAGAAACTAATACATGCTTATCAAACAAACTTAAATTTGGATTTGTTAGATATAGATAATTC AGACATAAAACGTGTTGATGAAGGCAAAGAATATATTCTTGGGTTAGCTAAAAAATATCACGTAAAGTTAAATTCATTAT CTCCGTTTATTCAATATACTAATTTAAATGAATGCCCTGCTGGGTGTTTTCCAAATAGGCTATATCCGAATTATATAGAG AGTGGAGGCATAAAACTAAATGAAGCTTTGATGGTGCGTGATTTAACAGATACTATTTTTAGTTCTAAAGTTATTACTAT AGTTGATGAAACAGTTGGTGTAGATTCATATAGACCTACTACAGAAAGTACAGTACGTGATGCAACAATAAAATTTCTTG AGAAGGTTATTAATACAAATGACTATGTAAATAAAAAAGAATTTATTATCTTGTTTCAGAGTAATAATCCGTTTATTTTA CGGCAAACTATTGCTACACAAAGACAAGTTAATGAGGTAGTGGACTATTATAATAAGTTATATGGTAAAAAGTATTCAAT ACAAGTTGATGGCATAGGTTATAAGTGTAAAGCAGATATATCGATAATTCATTCTGAGTTTGCAGCACTGATATTAGAAA AATGGAAGGATGCCACTAATAAAAATAAAGGCCTGTCCTCAAAACGATCTATCAATGATTTGCAATTTCAGACTCGAGAC CATTCCACAGCAATTTTACCTATGCTTGCTATTTCTTAA
Upstream 100 bases:
>100_bases ATCACAGAATTATTGATGGTAAGGAAGCAGTGACATTTTTAACTAAAGTAAAAAGCTATATAGAATCACCAGAAAGGCTA TTGCTTAATATTTAATTTTT
Downstream 100 bases:
>100_bases TAACCAAGTTGTTAGCTGTTAACATGACATCTTATGTAGTATATACAAAATAAGAAGTTGGTGTGTTAATACTTGACAAT CTGACATATTCTGCCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MKKKITVVIIVLVALITVNFAADGCGEKFMVLSNFELAASRLGFNGYNTSNLTVSATEHQEALLNVLQIAGYFHSEQLWQ AINALKVKDPVATFKQIYSVVKASGANQDDPSKFDAKILRKNFGEGTELDVQDIMDLILYLAQYAFNRKFGQERDEVVVQ NWMTKYKDEYLKEAEILQLIDREIPKYKNYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGDRELWANIDG VVPTVLEKLIHAYQTNLNLDLLDIDNSDIKRVDEGKEYILGLAKKYHVKLNSLSPFIQYTNLNECPAGCFPNRLYPNYIE SGGIKLNEALMVRDLTDTIFSSKVITIVDETVGVDSYRPTTESTVRDATIKFLEKVINTNDYVNKKEFIILFQSNNPFIL RQTIATQRQVNEVVDYYNKLYGKKYSIQVDGIGYKCKADISIIHSEFAALILEKWKDATNKNKGLSSKRSINDLQFQTRD HSTAILPMLAIS
Sequences:
>Translated_492_residues MKKKITVVIIVLVALITVNFAADGCGEKFMVLSNFELAASRLGFNGYNTSNLTVSATEHQEALLNVLQIAGYFHSEQLWQ AINALKVKDPVATFKQIYSVVKASGANQDDPSKFDAKILRKNFGEGTELDVQDIMDLILYLAQYAFNRKFGQERDEVVVQ NWMTKYKDEYLKEAEILQLIDREIPKYKNYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGDRELWANIDG VVPTVLEKLIHAYQTNLNLDLLDIDNSDIKRVDEGKEYILGLAKKYHVKLNSLSPFIQYTNLNECPAGCFPNRLYPNYIE SGGIKLNEALMVRDLTDTIFSSKVITIVDETVGVDSYRPTTESTVRDATIKFLEKVINTNDYVNKKEFIILFQSNNPFIL RQTIATQRQVNEVVDYYNKLYGKKYSIQVDGIGYKCKADISIIHSEFAALILEKWKDATNKNKGLSSKRSINDLQFQTRD HSTAILPMLAIS >Mature_492_residues MKKKITVVIIVLVALITVNFAADGCGEKFMVLSNFELAASRLGFNGYNTSNLTVSATEHQEALLNVLQIAGYFHSEQLWQ AINALKVKDPVATFKQIYSVVKASGANQDDPSKFDAKILRKNFGEGTELDVQDIMDLILYLAQYAFNRKFGQERDEVVVQ NWMTKYKDEYLKEAEILQLIDREIPKYKNYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGDRELWANIDG VVPTVLEKLIHAYQTNLNLDLLDIDNSDIKRVDEGKEYILGLAKKYHVKLNSLSPFIQYTNLNECPAGCFPNRLYPNYIE SGGIKLNEALMVRDLTDTIFSSKVITIVDETVGVDSYRPTTESTVRDATIKFLEKVINTNDYVNKKEFIILFQSNNPFIL RQTIATQRQVNEVVDYYNKLYGKKYSIQVDGIGYKCKADISIIHSEFAALILEKWKDATNKNKGLSSKRSINDLQFQTRD HSTAILPMLAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55998; Mature: 55998
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKITVVIIVLVALITVNFAADGCGEKFMVLSNFELAASRLGFNGYNTSNLTVSATEHQ CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCEEEEECHHH EALLNVLQIAGYFHSEQLWQAINALKVKDPVATFKQIYSVVKASGANQDDPSKFDAKILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KNFGEGTELDVQDIMDLILYLAQYAFNRKFGQERDEVVVQNWMTKYKDEYLKEAEILQLI HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DREIPKYKNYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGDRELWANIDG HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCHHHHHCCCC VVPTVLEKLIHAYQTNLNLDLLDIDNSDIKRVDEGKEYILGLAKKYHVKLNSLSPFIQYT HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCHHHHHHHHHHHHEEEECCCCCEEEEC NLNECPAGCFPNRLYPNYIESGGIKLNEALMVRDLTDTIFSSKVITIVDETVGVDSYRPT CCCCCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCC TESTVRDATIKFLEKVINTNDYVNKKEFIILFQSNNPFILRQTIATQRQVNEVVDYYNKL CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHH YGKKYSIQVDGIGYKCKADISIIHSEFAALILEKWKDATNKNKGLSSKRSINDLQFQTRD HCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC HSTAILPMLAIS CCCEEEHEEECC >Mature Secondary Structure MKKKITVVIIVLVALITVNFAADGCGEKFMVLSNFELAASRLGFNGYNTSNLTVSATEHQ CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCEEEEECHHH EALLNVLQIAGYFHSEQLWQAINALKVKDPVATFKQIYSVVKASGANQDDPSKFDAKILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KNFGEGTELDVQDIMDLILYLAQYAFNRKFGQERDEVVVQNWMTKYKDEYLKEAEILQLI HHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DREIPKYKNYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGDRELWANIDG HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCHHHHHCCCC VVPTVLEKLIHAYQTNLNLDLLDIDNSDIKRVDEGKEYILGLAKKYHVKLNSLSPFIQYT HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCHHHHHHHHHHHHEEEECCCCCEEEEC NLNECPAGCFPNRLYPNYIESGGIKLNEALMVRDLTDTIFSSKVITIVDETVGVDSYRPT CCCCCCCCCCCCCCCCHHHHCCCEEECHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCC TESTVRDATIKFLEKVINTNDYVNKKEFIILFQSNNPFILRQTIATQRQVNEVVDYYNKL CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHH YGKKYSIQVDGIGYKCKADISIIHSEFAALILEKWKDATNKNKGLSSKRSINDLQFQTRD HCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCC HSTAILPMLAIS CCCEEEHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA