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The map label for this gene is ykfC [C]

Identifier: 189183533

GI number: 189183533

Start: 652588

End: 652827

Strand: Direct

Name: ykfC [C]

Synonym: OTT_0626

Alternate gene names: 189183533

Gene position: 652588-652827 (Clockwise)

Preceding gene: 189183529

Following gene: 189183534

Centisome position: 32.48

GC content: 32.08

Gene sequence:

>240_bases
TTGCAAGCCAAAAGCTATTATCTACAAAGGGAAAGAGTTAAGATAATCCCTAAAGATACTGGAAATAAAATGAGAAATCT
ATCTATACCAACTACCAAAGATAGAGTGGTAGAAGGAGCACTAAAGCTTATTTTAGAACCAATATTTAAAGCTAATTTTC
AACCTGAATCATATAGATATTGCTCTAAACGAACTGCAGCTGAGGCTATAGAAACAGTTATAATATCAGCAATCAAATAG

Upstream 100 bases:

>100_bases
GCTAAGAATAATAAGGGAGTGCTAAGAATAGATTGCGTTATCTTTGAAATGATAGAGTTAGCTGTGGTTGAAACAATTTC
TAGAAAATATATAAACAGCA

Downstream 100 bases:

>100_bases
ATACTTAATTTATAACAATTTATTGATATATTGATAGCAATAAGAAGATATAATAATATTAATTATATCACATAAATAAT
ATATGGAGTATTGTGTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Reverse Transcriptase

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MQAKSYYLQRERVKIIPKDTGNKMRNLSIPTTKDRVVEGALKLILEPIFKANFQPESYRYCSKRTAAEAIETVIISAIK

Sequences:

>Translated_79_residues
MQAKSYYLQRERVKIIPKDTGNKMRNLSIPTTKDRVVEGALKLILEPIFKANFQPESYRYCSKRTAAEAIETVIISAIK
>Mature_79_residues
MQAKSYYLQRERVKIIPKDTGNKMRNLSIPTTKDRVVEGALKLILEPIFKANFQPESYRYCSKRTAAEAIETVIISAIK

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9075; Mature: 9075

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKSYYLQRERVKIIPKDTGNKMRNLSIPTTKDRVVEGALKLILEPIFKANFQPESYRY
CCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
CSKRTAAEAIETVIISAIK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQAKSYYLQRERVKIIPKDTGNKMRNLSIPTTKDRVVEGALKLILEPIFKANFQPESYRY
CCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
CSKRTAAEAIETVIISAIK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA