| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183498
Identifier: 189183498
GI number: 189183498
Start: 603568
End: 604335
Strand: Direct
Name: 189183498
Synonym: OTT_0591
Alternate gene names: NA
Gene position: 603568-604335 (Clockwise)
Preceding gene: 189183492
Following gene: 189183500
Centisome position: 30.04
GC content: 30.08
Gene sequence:
>768_bases ATGCATAAAATTTATACCTTAGATGATGGTAGGTTTATTGCTTACAAGCAACATAAAAGTCAAAAAAACAGTTTAATTAA TATTATTTTTCTCCATGGTATGATGTCCAACATGTCAGGTAAGAAGTCTAGTTATTTATATCAACTATGTCAAGAAGAAG ATCTCAACTTCTTAGCTTTTGACAATTATGGTCATGGTAATTCTTCTGGTCGATTTATTGATCAAACCATTGAGAGTTGG TTTGATGCGACTCGTGCTATTATGTATCACACTAGCAATAATTTTAAGAATATTATTGTTGGCTCGAGTTTAGGAGGTTG GTTAGCAATGCTAGCTGCTATTAAAAACGAAATTGAAATTAGTGGAGTAGTTGCTTTAGCTCCTGCAATAGATTTTACAG AAACTTTAATTTGGAATAAGCTTACTGAAAAAAATAAAAACAGTATGATTCATACAGGATATATTGAATTGGGTGGAACA GGAAATACGTGTAATAATAAGTATCATATAAGTTATAATCTAATATGTAATGCTAGGAAATATTTATTATTAAATAAACC TACTATTAATATTCAGTGTCCTATTGCTATTATTCATGGTATGCAGGATCAAGAGGTGCCATATCAAGGATCTATAGATC TAATTAATAAAGTTCAAGCTCATTATTCTACTCTTAAGCTACTAAAATATGCCGACCATTTTCTTTCAGATTCTGTTAGC TTAAGTCATATATCTTATGCTATCAAGGAAATTATTAATGCCAGATAG
Upstream 100 bases:
>100_bases ACACCAACATTTACGAGTGATGGTACGACTTGTAAAATTGTTTTTTTATGGTAAGTTATACTCATAATATTTTTCAATCT TTAATATTGATACTAAATAA
Downstream 100 bases:
>100_bases CGTAAGAGAGAAGATTGGCAAGTAACAGTTCTTTAATTGAGTCTTGTATTTAATGTATTCAAGAAACATCTATATTTAAA GCATACTAGACATCGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MHKIYTLDDGRFIAYKQHKSQKNSLINIIFLHGMMSNMSGKKSSYLYQLCQEEDLNFLAFDNYGHGNSSGRFIDQTIESW FDATRAIMYHTSNNFKNIIVGSSLGGWLAMLAAIKNEIEISGVVALAPAIDFTETLIWNKLTEKNKNSMIHTGYIELGGT GNTCNNKYHISYNLICNARKYLLLNKPTINIQCPIAIIHGMQDQEVPYQGSIDLINKVQAHYSTLKLLKYADHFLSDSVS LSHISYAIKEIINAR
Sequences:
>Translated_255_residues MHKIYTLDDGRFIAYKQHKSQKNSLINIIFLHGMMSNMSGKKSSYLYQLCQEEDLNFLAFDNYGHGNSSGRFIDQTIESW FDATRAIMYHTSNNFKNIIVGSSLGGWLAMLAAIKNEIEISGVVALAPAIDFTETLIWNKLTEKNKNSMIHTGYIELGGT GNTCNNKYHISYNLICNARKYLLLNKPTINIQCPIAIIHGMQDQEVPYQGSIDLINKVQAHYSTLKLLKYADHFLSDSVS LSHISYAIKEIINAR >Mature_255_residues MHKIYTLDDGRFIAYKQHKSQKNSLINIIFLHGMMSNMSGKKSSYLYQLCQEEDLNFLAFDNYGHGNSSGRFIDQTIESW FDATRAIMYHTSNNFKNIIVGSSLGGWLAMLAAIKNEIEISGVVALAPAIDFTETLIWNKLTEKNKNSMIHTGYIELGGT GNTCNNKYHISYNLICNARKYLLLNKPTINIQCPIAIIHGMQDQEVPYQGSIDLINKVQAHYSTLKLLKYADHFLSDSVS LSHISYAIKEIINAR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=241, Percent_Identity=28.6307053941909, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28866; Mature: 28866
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKIYTLDDGRFIAYKQHKSQKNSLINIIFLHGMMSNMSGKKSSYLYQLCQEEDLNFLAF CCEEEEECCCEEEEEECCCCCCCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCEEEE DNYGHGNSSGRFIDQTIESWFDATRAIMYHTSNNFKNIIVGSSLGGWLAMLAAIKNEIEI ECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCEE SGVVALAPAIDFTETLIWNKLTEKNKNSMIHTGYIELGGTGNTCNNKYHISYNLICNARK EEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCEE YLLLNKPTINIQCPIAIIHGMQDQEVPYQGSIDLINKVQAHYSTLKLLKYADHFLSDSVS EEEEECCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LSHISYAIKEIINAR HHHHHHHHHHHHCCC >Mature Secondary Structure MHKIYTLDDGRFIAYKQHKSQKNSLINIIFLHGMMSNMSGKKSSYLYQLCQEEDLNFLAF CCEEEEECCCEEEEEECCCCCCCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCEEEE DNYGHGNSSGRFIDQTIESWFDATRAIMYHTSNNFKNIIVGSSLGGWLAMLAAIKNEIEI ECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHCCCEE SGVVALAPAIDFTETLIWNKLTEKNKNSMIHTGYIELGGTGNTCNNKYHISYNLICNARK EEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEEECCEE YLLLNKPTINIQCPIAIIHGMQDQEVPYQGSIDLINKVQAHYSTLKLLKYADHFLSDSVS EEEEECCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LSHISYAIKEIINAR HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA