| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is gltA [H]
Identifier: 189183492
GI number: 189183492
Start: 598789
End: 599100
Strand: Direct
Name: gltA [H]
Synonym: OTT_0585
Alternate gene names: 189183492
Gene position: 598789-599100 (Clockwise)
Preceding gene: 189183491
Following gene: 189183498
Centisome position: 29.81
GC content: 28.53
Gene sequence:
>312_bases ATGGGTATGAATGTAATAGATATCACCAAATTATATACTGAGAGTAATTATTGTACTTATGATCCTGGTTTTATATCAAC TGCTTCATGCAAATCATCAATAACTTATATAGATGATAACCAAGGTATATTAATGCATCGTAGATATGATATTAGAGACT TAGCTACTAGTTGCAGTTTTTTAGAGGTATGTTATTTATTACTAAATGGTTCATTGCCTACTCAAAAACAAAACGAAAAT TTTGCTAAAGAGGTGAGTGATCATACTATACTAACTGAACAACTTTGTAATTTGTTAATAACGTCAATTTAG
Upstream 100 bases:
>100_bases TTGTAGATTTATAATATTATTTAAAATTGAAGATAATGACAGATAAAAATTATGTTGAACTTAAGGTTGAAAATCAAATA ATTTTACTTTCAAATCTGCT
Downstream 100 bases:
>100_bases GATAAGGAGTCAGGAGAAGAAGAAGAGATAAGACTGGGATTAAGTTTGGAGATAGAATAACTAGCAAAAGAAGCAATTAT ATGAACAAGGAAATTAATAG
Product: citrate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSFLEVCYLLLNGSLPTQKQNEN FAKEVSDHTILTEQLCNLLITSI
Sequences:
>Translated_103_residues MGMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSFLEVCYLLLNGSLPTQKQNEN FAKEVSDHTILTEQLCNLLITSI >Mature_102_residues GMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSFLEVCYLLLNGSLPTQKQNENF AKEVSDHTILTEQLCNLLITSI
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786939, Length=99, Percent_Identity=50.5050505050505, Blast_Score=107, Evalue=1e-25,
Paralogues:
None
Copy number: 624 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 - InterPro: IPR010953 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 11670; Mature: 11539
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSF CCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHH LEVCYLLLNGSLPTQKQNENFAKEVSDHTILTEQLCNLLITSI HHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure GMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSF CCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHH LEVCYLLLNGSLPTQKQNENFAKEVSDHTILTEQLCNLLITSI HHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3112124; 9823893; 7557459 [H]