Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is gltA [H]

Identifier: 189183492

GI number: 189183492

Start: 598789

End: 599100

Strand: Direct

Name: gltA [H]

Synonym: OTT_0585

Alternate gene names: 189183492

Gene position: 598789-599100 (Clockwise)

Preceding gene: 189183491

Following gene: 189183498

Centisome position: 29.81

GC content: 28.53

Gene sequence:

>312_bases
ATGGGTATGAATGTAATAGATATCACCAAATTATATACTGAGAGTAATTATTGTACTTATGATCCTGGTTTTATATCAAC
TGCTTCATGCAAATCATCAATAACTTATATAGATGATAACCAAGGTATATTAATGCATCGTAGATATGATATTAGAGACT
TAGCTACTAGTTGCAGTTTTTTAGAGGTATGTTATTTATTACTAAATGGTTCATTGCCTACTCAAAAACAAAACGAAAAT
TTTGCTAAAGAGGTGAGTGATCATACTATACTAACTGAACAACTTTGTAATTTGTTAATAACGTCAATTTAG

Upstream 100 bases:

>100_bases
TTGTAGATTTATAATATTATTTAAAATTGAAGATAATGACAGATAAAAATTATGTTGAACTTAAGGTTGAAAATCAAATA
ATTTTACTTTCAAATCTGCT

Downstream 100 bases:

>100_bases
GATAAGGAGTCAGGAGAAGAAGAAGAGATAAGACTGGGATTAAGTTTGGAGATAGAATAACTAGCAAAAGAAGCAATTAT
ATGAACAAGGAAATTAATAG

Product: citrate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MGMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSFLEVCYLLLNGSLPTQKQNEN
FAKEVSDHTILTEQLCNLLITSI

Sequences:

>Translated_103_residues
MGMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSFLEVCYLLLNGSLPTQKQNEN
FAKEVSDHTILTEQLCNLLITSI
>Mature_102_residues
GMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSFLEVCYLLLNGSLPTQKQNENF
AKEVSDHTILTEQLCNLLITSI

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0372

COG function: function code C; Citrate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the citrate synthase family [H]

Homologues:

Organism=Escherichia coli, GI1786939, Length=99, Percent_Identity=50.5050505050505, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: 624 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016142
- InterPro:   IPR016143
- InterPro:   IPR002020
- InterPro:   IPR016141
- InterPro:   IPR019810
- InterPro:   IPR010953 [H]

Pfam domain/function: PF00285 Citrate_synt [H]

EC number: =2.3.3.1 [H]

Molecular weight: Translated: 11670; Mature: 11539

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSF
CCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHH
LEVCYLLLNGSLPTQKQNENFAKEVSDHTILTEQLCNLLITSI
HHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GMNVIDITKLYTESNYCTYDPGFISTASCKSSITYIDDNQGILMHRRYDIRDLATSCSF
CCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHH
LEVCYLLLNGSLPTQKQNENFAKEVSDHTILTEQLCNLLITSI
HHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3112124; 9823893; 7557459 [H]