Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189183443
Identifier: 189183443
GI number: 189183443
Start: 557472
End: 557888
Strand: Direct
Name: 189183443
Synonym: OTT_0536
Alternate gene names: NA
Gene position: 557472-557888 (Clockwise)
Preceding gene: 189183442
Following gene: 189183444
Centisome position: 27.75
GC content: 36.93
Gene sequence:
>417_bases ATGAAAACACTTAAACATACAACTGCAAAAGCCTCTTATTACAACACAAGGGCTGAGTGCTATGATGAATTTAATGAAAA TAATTCGAGGGCCATCAATGCGCTTTTAGAGAAAATATTAAAAGAACATCATGTTGCTACCGTTCTTGATCTTACTTGCG GTACTGGTTCTCAAGTCTTTTGGCTCATCGAGGCAGGCTTTGAAGTCGTAAGTAGCGACATTAGCCTGAACATGCTCAAA ATTGCTAAACAAAAAGCGAAACTAAAAGCCGACACATTTTTTATCTATCCATACGAAAACAATCCTAGAGCTATAAGAGT TTATAATAAAGCCAGCTTTACTAAAGTTGGGCAATATCAAGCAACGCAAGGAGCATTCATCGGACACAACAGCGATTTAA TGGTAAAAAAACTATGA
Upstream 100 bases:
>100_bases ATCTCCCACCCTAATTTATTTTCGCTAAATGTTAGCAATTTAAGCCTGGAAGATACAGCAGAAGCGATTATGAATCATAT AAACTAGGTCAGAGGTGAAT
Downstream 100 bases:
>100_bases CTATTACAAACATCAACTACATCACTTTAGCTGTTACTGACATCCATCGATCTTTCTCGTTTTACAAAGATGTTTTAGGA TTTAAACCATTAGTTAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVFWLIEAGFEVVSSDISLNMLK IAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQATQGAFIGHNSDLMVKKL
Sequences:
>Translated_138_residues MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVFWLIEAGFEVVSSDISLNMLK IAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQATQGAFIGHNSDLMVKKL >Mature_138_residues MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVFWLIEAGFEVVSSDISLNMLK IAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQATQGAFIGHNSDLMVKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15630; Mature: 15630
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVF CCCCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE WLIEAGFEVVSSDISLNMLKIAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQ EEEECCHHHHHCCCCHHHHHHHHHHHCEECCEEEEEEEECCCCEEEEECCCCCEECCCCC ATQGAFIGHNSDLMVKKL CCCCEEECCCCCEEEEEC >Mature Secondary Structure MKTLKHTTAKASYYNTRAECYDEFNENNSRAINALLEKILKEHHVATVLDLTCGTGSQVF CCCCCCCCCCCHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEE WLIEAGFEVVSSDISLNMLKIAKQKAKLKADTFFIYPYENNPRAIRVYNKASFTKVGQYQ EEEECCHHHHHCCCCHHHHHHHHHHHCEECCEEEEEEEECCCCEEEEECCCCCEECCCCC ATQGAFIGHNSDLMVKKL CCCCEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA