Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183444

Identifier: 189183444

GI number: 189183444

Start: 558342

End: 558728

Strand: Direct

Name: 189183444

Synonym: OTT_0537

Alternate gene names: NA

Gene position: 558342-558728 (Clockwise)

Preceding gene: 189183443

Following gene: 189183445

Centisome position: 27.79

GC content: 30.75

Gene sequence:

>387_bases
ATGGACAATTTAGAACAAATATTTCATATTTGGCAAGTGCTGTATGCTAAAGATCAAGATCCAAAATTGGTCATAGAAGA
GTTTTTTCATGAGGATTACACCCAATCTATTAATGGTATCATTTTAAATAGGGTTGAGTATATCAGACATGTAATAGAGC
AACGGAAGAATATTCAAACAATGGAGTTTGAATGCAAAATTCATATGTCTCAAAATGACAAATTATTTATTCTTTATGAT
GCCAAAGGTACCAATACCGAGGGCGATGAAATCATAGCAGAAGTAATCTCTTATTTTGAATTTAATGATCAAAAGATATT
TAAAATTCATGGTCAGGTATATTTATTGAAAGGGAATCCATCTGATGTTGACATGAGTCAGGAATAA

Upstream 100 bases:

>100_bases
ATTGCAGGCAAAAAAGCCAACCTTGGTAACTGGAAAAATGTGGAGTGGTTTGTTATGATTAACTACTTTTTGTTAATAGT
AAAAAATGAGAGATAATATA

Downstream 100 bases:

>100_bases
CTATGGCCACTACATTTATTTTGAGCCCAGATCTTGCCCGCAAACTCATAGCGGAGCAATTTCCAGAATACGCTAGCTTA
ACTATCGTTGATGTTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MDNLEQIFHIWQVLYAKDQDPKLVIEEFFHEDYTQSINGIILNRVEYIRHVIEQRKNIQTMEFECKIHMSQNDKLFILYD
AKGTNTEGDEIIAEVISYFEFNDQKIFKIHGQVYLLKGNPSDVDMSQE

Sequences:

>Translated_128_residues
MDNLEQIFHIWQVLYAKDQDPKLVIEEFFHEDYTQSINGIILNRVEYIRHVIEQRKNIQTMEFECKIHMSQNDKLFILYD
AKGTNTEGDEIIAEVISYFEFNDQKIFKIHGQVYLLKGNPSDVDMSQE
>Mature_128_residues
MDNLEQIFHIWQVLYAKDQDPKLVIEEFFHEDYTQSINGIILNRVEYIRHVIEQRKNIQTMEFECKIHMSQNDKLFILYD
AKGTNTEGDEIIAEVISYFEFNDQKIFKIHGQVYLLKGNPSDVDMSQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15262; Mature: 15262

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLEQIFHIWQVLYAKDQDPKLVIEEFFHEDYTQSINGIILNRVEYIRHVIEQRKNIQT
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
MEFECKIHMSQNDKLFILYDAKGTNTEGDEIIAEVISYFEFNDQKIFKIHGQVYLLKGNP
EEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCC
SDVDMSQE
CCCCCCCC
>Mature Secondary Structure
MDNLEQIFHIWQVLYAKDQDPKLVIEEFFHEDYTQSINGIILNRVEYIRHVIEQRKNIQT
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
MEFECKIHMSQNDKLFILYDAKGTNTEGDEIIAEVISYFEFNDQKIFKIHGQVYLLKGNP
EEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCC
SDVDMSQE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA