| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183387
Identifier: 189183387
GI number: 189183387
Start: 502015
End: 502338
Strand: Direct
Name: 189183387
Synonym: OTT_0480
Alternate gene names: NA
Gene position: 502015-502338 (Clockwise)
Preceding gene: 189183386
Following gene: 189183388
Centisome position: 24.99
GC content: 30.86
Gene sequence:
>324_bases ATGAAAGTCTTATTTACTACTTCTCCAAATGAGGTAGAAAGGCAAATAGCAGACATGAAAGTGGCATCTAGTAATACTGA ATCTTTAAATAAATTTTTTCATGATCATTTGCAATTTGTTAAAGGTTCAAATGTATCTTCAGTCTTTTTTCCGAAGAATA TTGAAGTAATAAAGGATGGAGTATTAATTAGTGGAACGCTTCGTTATTGGTTTAGCGATAGTAAACATATAGCTGTCGAT AAGACTTACTTTCTGACTTACAAACGAACTCCTAATTGCCTTTTATTGTTGACTGGTGTTAAAGAGAATGGAATAAAAAA ATGA
Upstream 100 bases:
>100_bases AAAGTGGTTATTAATTCCAGCAATAGAGCCTGATCGCAAAATGACGATATCGTCCAAAAATTATCATGAAACCTATTTAA AGGAATAGGCAATTTTTGTG
Downstream 100 bases:
>100_bases GTATTAGAATTTTGAGATTTATCATAGGGTTTATTGCTTTGGTAAACGTTAATAATATATATGCAGTAGAATATGAGTTA GAAGCTGACAATTTACTAAA
Product: putative conjugative transfer protein TraE
Products: NA
Alternate protein names: Conjugative Transfer Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDGVLISGTLRYWFSDSKHIAVD KTYFLTYKRTPNCLLLLTGVKENGIKK
Sequences:
>Translated_107_residues MKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDGVLISGTLRYWFSDSKHIAVD KTYFLTYKRTPNCLLLLTGVKENGIKK >Mature_107_residues MKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDGVLISGTLRYWFSDSKHIAVD KTYFLTYKRTPNCLLLLTGVKENGIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12202; Mature: 12202
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDG CEEEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECC VLISGTLRYWFSDSKHIAVDKTYFLTYKRTPNCLLLLTGVKENGIKK EEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC >Mature Secondary Structure MKVLFTTSPNEVERQIADMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNIEVIKDG CEEEEECCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECC VLISGTLRYWFSDSKHIAVDKTYFLTYKRTPNCLLLLTGVKENGIKK EEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA