| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183386
Identifier: 189183386
GI number: 189183386
Start: 501785
End: 501928
Strand: Direct
Name: 189183386
Synonym: OTT_0479
Alternate gene names: NA
Gene position: 501785-501928 (Clockwise)
Preceding gene: 189183385
Following gene: 189183387
Centisome position: 24.98
GC content: 30.56
Gene sequence:
>144_bases ATGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCT AGCTGCAGCTAATATAATTGCGATAATGGCCGCACAATTACAAAAGAAGAAAAGTGGTTATTAA
Upstream 100 bases:
>100_bases TATCAGAGAATTTTTTGCTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCCAGCTCCATTAGGATATTCAAGACTGCTG GGCAAAAAAGTTGGCAAATA
Downstream 100 bases:
>100_bases TTCCAGCAATAGAGCCTGATCGCAAAATGACGATATCGTCCAAAAATTATCATGAAACCTATTTAAAGGAATAGGCAATT TTTGTGATGAAAGTCTTATT
Product: putative conjugative transfer protein TraE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAQLQKKKSGY
Sequences:
>Translated_47_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAQLQKKKSGY >Mature_47_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAQLQKKKSGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5247; Mature: 5247
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAQLQKKKSGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAQLQKKKSGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA