| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183381
Identifier: 189183381
GI number: 189183381
Start: 496971
End: 497747
Strand: Direct
Name: 189183381
Synonym: OTT_0474
Alternate gene names: NA
Gene position: 496971-497747 (Clockwise)
Preceding gene: 189183380
Following gene: 189183382
Centisome position: 24.74
GC content: 31.4
Gene sequence:
>777_bases ATGCTGCCCAAAAGAAAAAGACTAGCAGATTATTATCCACTAACGCCAGAAGATGCAGTTATACTGCAACGTATGTCTAG TAGAAGCTTCAACATATACTTCATAAATCAATTACTGTTGAAGTTATCAAATAAATATCCAAACCGTCATTTTGAAAATA AGACAGCAGTGCTAAACTATATGGCAAAAGCGTTAGCAAATGAATTACTAACTACTGATCAGGCTAATAGTGAAAATTTT AGATTTAATGATGTAGGAAGATTTAAAGAACAGTATCTAGCAAATATTGAATCTGGTACAGATCGTAGTATGAAGGCTCA GTTGAAGCGTAAAATAGCTGGAGTCTTTGAAGCAGATATGGCTTATAAAATTTTAACATCTTGTGATTTTGGGGCAGGGG TTAAAAACAAATATTACATCAAGTTGCTTAAGAATATTACACTGTCAGATCATATTAAATTCAAGATACTACAGGAGGTA CGAGCTGTCCATGGCAACGATATTGAGCAGTTACAAGTTATACCATTTGATGAATCAAAACAGGTTACAAATAGCACAAT GGAGTATCAAAAAACAACAGTTTTACAGCAACAAATAAGTGATGAAGATTACTTTTCAGAACTTAGTAAAGAGCTAGGAT CTAACTCTATATTGTTCAAAGTACGAAAATACATACTTCAACATTACGAATATGAGCAAGTTATTGATAAAATATGGTTT AGTAAATTAGAAGTTGTAAATGAAGATAATGTTAATAATAAGATATTCTATAGGTAA
Upstream 100 bases:
>100_bases GTGATGTTAGTAATAAAAAGCCATCAAACAAGGATTATGAGCAAAATAGTGAGTTATCAACTCCAGCTATTACTAAGGAT TCAGAGGTTGAAAAGAATGA
Downstream 100 bases:
>100_bases AGGTGCAAAGACATATCAAATATAAGGAAGAAGAGAAGTTAATTTTTATTAACTTCTACACTTTATAGAACCTACTATTA ACTTATGTTAACCTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENF RFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYKILTSCDFGAGVKNKYYIKLLKNITLSDHIKFKILQEV RAVHGNDIEQLQVIPFDESKQVTNSTMEYQKTTVLQQQISDEDYFSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWF SKLEVVNEDNVNNKIFYR
Sequences:
>Translated_258_residues MLPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENF RFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYKILTSCDFGAGVKNKYYIKLLKNITLSDHIKFKILQEV RAVHGNDIEQLQVIPFDESKQVTNSTMEYQKTTVLQQQISDEDYFSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWF SKLEVVNEDNVNNKIFYR >Mature_258_residues MLPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENF RFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYKILTSCDFGAGVKNKYYIKLLKNITLSDHIKFKILQEV RAVHGNDIEQLQVIPFDESKQVTNSTMEYQKTTVLQQQISDEDYFSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWF SKLEVVNEDNVNNKIFYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30308; Mature: 30308
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNY CCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHH MAKALANELLTTDQANSENFRFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADM HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AYKILTSCDFGAGVKNKYYIKLLKNITLSDHIKFKILQEVRAVHGNDIEQLQVIPFDESK HHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCCH QVTNSTMEYQKTTVLQQQISDEDYFSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWF HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH SKLEVVNEDNVNNKIFYR HHHHHHCCCCCCCEEEEC >Mature Secondary Structure MLPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKYPNRHFENKTAVLNY CCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHH MAKALANELLTTDQANSENFRFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADM HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AYKILTSCDFGAGVKNKYYIKLLKNITLSDHIKFKILQEVRAVHGNDIEQLQVIPFDESK HHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCCH QVTNSTMEYQKTTVLQQQISDEDYFSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWF HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH SKLEVVNEDNVNNKIFYR HHHHHHCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA