Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183380

Identifier: 189183380

GI number: 189183380

Start: 495501

End: 496007

Strand: Direct

Name: 189183380

Synonym: OTT_0473

Alternate gene names: NA

Gene position: 495501-496007 (Clockwise)

Preceding gene: 189183379

Following gene: 189183381

Centisome position: 24.66

GC content: 29.98

Gene sequence:

>507_bases
GTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATAGA
GGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCA
GGGTCAGTATGATAGCGGGGCTTTGTAATAATCAAATTATAGCACCAGTAATATTTGAAGGAAATTGTAATAAAGAAATA
TTTACAACTTATGTAGAAACTATATTAATCAAAGAATTGCACCCTGGACAAATAGTAATTATGGATAATATCAACTTCCA
TAAGAATAATACAATTAAAGTATTAATAGAATCGGTTGGCTGCAGTATTCTATTCTTACCTACATATAGTCCAGATTTAA
ATCCTATAGAACATTATTGGTTTAAGATTAAGAACGAAATAAGAAAAGTTACTCCTCAATTCAAAGATATTAGCATGGCT
GTAGCACACGTAATGCAGTTTATCTGA

Upstream 100 bases:

>100_bases
ATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAAACTCATT
TTCATCCCAAAAGGGATATT

Downstream 100 bases:

>100_bases
TTGTACCTATTTCCTACGTTATTGCTATATTCTAAGGCCATCAGCAACTGTTCCTCCAAATTAAGCTTATTTTTACGCCC
ACCTTTTGATTTCTTAAGAC

Product: transposase

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde6 Transposase OrfB; ISHde5 Transposase OrfA; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI
FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMA
VAHVMQFI

Sequences:

>Translated_168_residues
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI
FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMA
VAHVMQFI
>Mature_168_residues
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI
FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMA
VAHVMQFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19416; Mature: 19416

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
LCNNQIIAPVIFEGNCNKEIFTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVG
HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC
CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMAVAHVMQFI
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH
LCNNQIIAPVIFEGNCNKEIFTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVG
HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC
CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMAVAHVMQFI
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA