| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is bcr2 [H]
Identifier: 189183361
GI number: 189183361
Start: 475774
End: 476955
Strand: Direct
Name: bcr2 [H]
Synonym: OTT_0454
Alternate gene names: 189183361
Gene position: 475774-476955 (Clockwise)
Preceding gene: 189183350
Following gene: 189183363
Centisome position: 23.68
GC content: 29.44
Gene sequence:
>1182_bases ATGATAAATAACCATTGGAAGTATAATTTAACGATAATCACTCTGCTAATATTTATTACAGAGTTAGCAACTGATATTTA TGTTCCTAGCTTACCTAGAATAGCTAGCGCATTTAATACATCAGAGTATAAAGTAATGTTGACTGTAAGTATCAACCTAA TAGGGTTATCATTATCTGGATTATTATATGGTCCATTATCTGATGCAATAGGGCGTAAGAAAGTTTTACTATTAGGAATA ACAATTTTTTGTTTTTCGAGTTTATTTTGTATATACGTAAGCACGATTGAGTTAATAGTATTTTGGAGATTATTACAAGG AATTGGAGGTGGAGCCTCAGTTACAGTTGGGTTAGCTACAATAAGCGATATATATAAAGGTAATGAAAGAGCAAAAATGA TGTCAAGACTAAATATGGTAGTTGCTTTTTCTCCAGCACTTGGGCCTATAATTGGTAGTCAGATAGCAGCATATGATAAT AGGTGGTATTTACCACTTGCTATCATTCCTTCTCTTGCATTTCCAGTACTTTTATTACTAATAACTTTATTCAAGGAAAC TTTAACTCAGACAAATATAGGAATTAATTTTAATAATATTAAAGCTAGCTTTAAGGAAGTATTATCTAATAAAAATTTTA TATGTTATTTATTGATTCAATCTTTAACATTTGGATGGTTATGGGCAGATATAGTAAACTTACCATTTATTTTTATTAAA GATATGAATGTTCCAACAGAGCACTACGGATATTACATTATTGCAAATGTTACAGTCTATATTATAGGTATTGTAGCCAA TCAAAAACTTGTCCAATTTAAAGGACCTGAAAAAATGATACTATATGGTATTGTATTAATACTATTCAGCGGTATATCAT TAACTTTTGGTACAATCTATTTTACTCTGACAGCATATATAGTTCTACTTCTTAAGTTACCAGCTGCTATTGGAGTTGGA TTTACTTTAGGTAATGCATCAGCATTATCTTTAATGCAAATTACAAACTATGGAACAGCCTCTGCAATCATAGGTTCTAC TGAAATGCTTTTAGGATCCTTAGGTATAAAAATAATCAGTTATCTCTATAATGGTACGATATTACCTCTTTCGATATTAG TAGTAGTATTTTCATTAATTTCTTTGCTTATTTTTCAGAAAATAAAATCTCCTACTGTTTAA
Upstream 100 bases:
>100_bases ATGCTTATGTATTAAGTAGTTTAATTGTATTATTAATATGCTCATTTTTGCAGAAATCATGCTAAGTAAAGTTAAACAAT AGTTTTATAATGTTGATACA
Downstream 100 bases:
>100_bases TCGCAAAAAGAGAAACAATTTATAAACACCAAGGATAATGAGTTAGAAGAGAAAGAAGAGGAGATAAGATTGGAATTAAG CTGGAGGAGATAGAATAAGT
Product: drug resistance transporter, Bcr/CflA family protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MINNHWKYNLTIITLLIFITELATDIYVPSLPRIASAFNTSEYKVMLTVSINLIGLSLSGLLYGPLSDAIGRKKVLLLGI TIFCFSSLFCIYVSTIELIVFWRLLQGIGGGASVTVGLATISDIYKGNERAKMMSRLNMVVAFSPALGPIIGSQIAAYDN RWYLPLAIIPSLAFPVLLLLITLFKETLTQTNIGINFNNIKASFKEVLSNKNFICYLLIQSLTFGWLWADIVNLPFIFIK DMNVPTEHYGYYIIANVTVYIIGIVANQKLVQFKGPEKMILYGIVLILFSGISLTFGTIYFTLTAYIVLLLKLPAAIGVG FTLGNASALSLMQITNYGTASAIIGSTEMLLGSLGIKIISYLYNGTILPLSILVVVFSLISLLIFQKIKSPTV
Sequences:
>Translated_393_residues MINNHWKYNLTIITLLIFITELATDIYVPSLPRIASAFNTSEYKVMLTVSINLIGLSLSGLLYGPLSDAIGRKKVLLLGI TIFCFSSLFCIYVSTIELIVFWRLLQGIGGGASVTVGLATISDIYKGNERAKMMSRLNMVVAFSPALGPIIGSQIAAYDN RWYLPLAIIPSLAFPVLLLLITLFKETLTQTNIGINFNNIKASFKEVLSNKNFICYLLIQSLTFGWLWADIVNLPFIFIK DMNVPTEHYGYYIIANVTVYIIGIVANQKLVQFKGPEKMILYGIVLILFSGISLTFGTIYFTLTAYIVLLLKLPAAIGVG FTLGNASALSLMQITNYGTASAIIGSTEMLLGSLGIKIISYLYNGTILPLSILVVVFSLISLLIFQKIKSPTV >Mature_393_residues MINNHWKYNLTIITLLIFITELATDIYVPSLPRIASAFNTSEYKVMLTVSINLIGLSLSGLLYGPLSDAIGRKKVLLLGI TIFCFSSLFCIYVSTIELIVFWRLLQGIGGGASVTVGLATISDIYKGNERAKMMSRLNMVVAFSPALGPIIGSQIAAYDN RWYLPLAIIPSLAFPVLLLLITLFKETLTQTNIGINFNNIKASFKEVLSNKNFICYLLIQSLTFGWLWADIVNLPFIFIK DMNVPTEHYGYYIIANVTVYIIGIVANQKLVQFKGPEKMILYGIVLILFSGISLTFGTIYFTLTAYIVLLLKLPAAIGVG FTLGNASALSLMQITNYGTASAIIGSTEMLLGSLGIKIISYLYNGTILPLSILVVVFSLISLLIFQKIKSPTV
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=357, Percent_Identity=25.7703081232493, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1790146, Length=360, Percent_Identity=25.5555555555556, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI48994889, Length=272, Percent_Identity=27.2058823529412, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790794, Length=380, Percent_Identity=25.7894736842105, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082312, Length=199, Percent_Identity=27.6381909547739, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787065, Length=359, Percent_Identity=25.3481894150418, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324264, Length=159, Percent_Identity=27.0440251572327, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43211; Mature: 43211
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNHWKYNLTIITLLIFITELATDIYVPSLPRIASAFNTSEYKVMLTVSINLIGLSLSG CCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEEEEEEEEECC LLYGPLSDAIGRKKVLLLGITIFCFSSLFCIYVSTIELIVFWRLLQGIGGGASVTVGLAT EEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHH ISDIYKGNERAKMMSRLNMVVAFSPALGPIIGSQIAAYDNRWYLPLAIIPSLAFPVLLLL HHHHHCCCHHHHHHHHHCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH ITLFKETLTQTNIGINFNNIKASFKEVLSNKNFICYLLIQSLTFGWLWADIVNLPFIFIK HHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEE DMNVPTEHYGYYIIANVTVYIIGIVANQKLVQFKGPEKMILYGIVLILFSGISLTFGTIY CCCCCHHHCCEEEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHH FTLTAYIVLLLKLPAAIGVGFTLGNASALSLMQITNYGTASAIIGSTEMLLGSLGIKIIS HHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHH YLYNGTILPLSILVVVFSLISLLIFQKIKSPTV HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINNHWKYNLTIITLLIFITELATDIYVPSLPRIASAFNTSEYKVMLTVSINLIGLSLSG CCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEEEEEEEEECC LLYGPLSDAIGRKKVLLLGITIFCFSSLFCIYVSTIELIVFWRLLQGIGGGASVTVGLAT EEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHH ISDIYKGNERAKMMSRLNMVVAFSPALGPIIGSQIAAYDNRWYLPLAIIPSLAFPVLLLL HHHHHCCCHHHHHHHHHCEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH ITLFKETLTQTNIGINFNNIKASFKEVLSNKNFICYLLIQSLTFGWLWADIVNLPFIFIK HHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEE DMNVPTEHYGYYIIANVTVYIIGIVANQKLVQFKGPEKMILYGIVLILFSGISLTFGTIY CCCCCHHHCCEEEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHH FTLTAYIVLLLKLPAAIGVGFTLGNASALSLMQITNYGTASAIIGSTEMLLGSLGIKIIS HHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHH YLYNGTILPLSILVVVFSLISLLIFQKIKSPTV HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]