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The map label for this gene is traU [H]

Identifier: 189183363

GI number: 189183363

Start: 478909

End: 479490

Strand: Direct

Name: traU [H]

Synonym: OTT_0456

Alternate gene names: 189183363

Gene position: 478909-479490 (Clockwise)

Preceding gene: 189183361

Following gene: 189183364

Centisome position: 23.84

GC content: 38.14

Gene sequence:

>582_bases
TTGTTGGCGATAGTAATGGCTATAACAGCTAATAACTGTTATGCAGCTGCTGGGTGTGTTGGAAGATTTGTAAATCCTAT
AACAGATGTATGTTGGAAGTGCTTGTTTCCAATTACTATAGCTGGATTTAAGGTAGTGAGTAGTTCAATGCCAGATACTA
ATCCTTCTGGTAGACTTATATGTCTTTGTCCTAAACCAGGAATTCCAGTGCCTGTACCTGGTATTCCTGTAGGATTTTGG
GAACTAGTACGCCTTGTAGATGTTACAAAGTCACCAATGTGTATGGTAAGTCTTGGAGGTTTTTCATTTGGAAGCGCCGC
ACAGAAAGGCATGAAAGACGAGGCTGAAGGAAGCGCTTTTTATCACATTCATTGGTATGTCTATCCTGTAATTTATTGGC
TAAAGATTTTGCTTGATTTTATTTGTCTGGAAATGGCTGCAGTCGATATAGCATATTTAACAGAGTTTGATCCATTATGG
AGTGATGATGCTAAATCTACGATTTTAAATCCAGAAACGTTGTTGTTTCAAAATGTAGCTGCTTATCAAGCATGTATAGC
TGATTGCATGAGTTATAGGTGA

Upstream 100 bases:

>100_bases
AGGTGGTGAAACTTTATATTTAATTCCAGGAAATAGATATCCAAAACTTCTTCATAAAACTTCATCAATGCAAGCAAAGT
GAGTAAAGGAACTGGCAATC

Downstream 100 bases:

>100_bases
GTCAAGATAAGGTGAATTAATCTTACTGGTGAAAGTCTTGTTATGGAAGGAGAAGCTAGCTCTACCATATAGCGAATCTT
GTACGACTAAAGGTAACGAC

Product: putative conjugative transfer protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLAIVMAITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNPSGRLICLCPKPGIPVPVPGIPVGFW
ELVRLVDVTKSPMCMVSLGGFSFGSAAQKGMKDEAEGSAFYHIHWYVYPVIYWLKILLDFICLEMAAVDIAYLTEFDPLW
SDDAKSTILNPETLLFQNVAAYQACIADCMSYR

Sequences:

>Translated_193_residues
MLAIVMAITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNPSGRLICLCPKPGIPVPVPGIPVGFW
ELVRLVDVTKSPMCMVSLGGFSFGSAAQKGMKDEAEGSAFYHIHWYVYPVIYWLKILLDFICLEMAAVDIAYLTEFDPLW
SDDAKSTILNPETLLFQNVAAYQACIADCMSYR
>Mature_193_residues
MLAIVMAITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNPSGRLICLCPKPGIPVPVPGIPVGFW
ELVRLVDVTKSPMCMVSLGGFSFGSAAQKGMKDEAEGSAFYHIHWYVYPVIYWLKILLDFICLEMAAVDIAYLTEFDPLW
SDDAKSTILNPETLLFQNVAAYQACIADCMSYR

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 21168; Mature: 21168

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIVMAITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNPSGRLI
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
CLCPKPGIPVPVPGIPVGFWELVRLVDVTKSPMCMVSLGGFSFGSAAQKGMKDEAEGSAF
EEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCEE
YHIHWYVYPVIYWLKILLDFICLEMAAVDIAYLTEFDPLWSDDAKSTILNPETLLFQNVA
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHH
AYQACIADCMSYR
HHHHHHHHHHCCC
>Mature Secondary Structure
MLAIVMAITANNCYAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNPSGRLI
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
CLCPKPGIPVPVPGIPVGFWELVRLVDVTKSPMCMVSLGGFSFGSAAQKGMKDEAEGSAF
EEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCEE
YHIHWYVYPVIYWLKILLDFICLEMAAVDIAYLTEFDPLWSDDAKSTILNPETLLFQNVA
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHH
AYQACIADCMSYR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]