| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is tlc2 [H]
Identifier: 189183337
GI number: 189183337
Start: 446793
End: 448325
Strand: Direct
Name: tlc2 [H]
Synonym: OTT_0430
Alternate gene names: 189183337
Gene position: 446793-448325 (Clockwise)
Preceding gene: 189183335
Following gene: 189183338
Centisome position: 22.24
GC content: 27.2
Gene sequence:
>1533_bases ATGTTTTATATACAATCAAATTTAGGACTATCTTATCTTCAAAAGCTACGTAATAGCAAATTAAGACAAATATTATGGCC AATTAGGTCGCCAGAACTAATGAAATTCATTTTAATGGCTTTATTAATGTTTGCTGTTCTATTAAATCAAAATGTTGTTA GAGCTATTAAAAATACTATTGTAACCACTCAAATTGGAGCAGAGTCAATTAGTTTCATAAAGTTTTGGGGAGAAATGCCA ATTGGATTTCTGTTTATCATTTTTTACTCAAAATTATGCAATGTAGTCACAGCTGAAAAAGCGTTTAGAATTATAGTTCT ATCGTTTTTACTATTCTTTGCAGCTTATAGTTTTATCATTTTGCCAAATCATACTTTATTTTATCCAAATCCTGAAACTG TTGAACTATATATATTGCGATTTCCTCACTTTAAATGGTTTATAAAAATGTGGGGACATTGGGGAGATGTACTATTTTAC ATCATAGGAGAGTTATGGCCAATTGTAGTTTTTTCATTACTTTATTGGCAGTTAGCTAATAAAATTACTACTACTAAAGA AGCTGGTCATTTTTATCCATTCCTTACTTTATTTGGGCAATCTAATTTACTTATATCTGGTAATATAGTGGTATATTTTT CTAGGGAAAATCATATTTTAACAAAATGGTTTGGTAGCGGGTTGAGTAAAGATGAATTATCGATAAAATCATTAATGATA ATTGTTATTCTATCAACAATTATCATATTATTATTACATCGTTTGATAGAAACTTACATAATACACTCACTCAAAAATAA TAGTATACGCTCAAGCAATAATGAATACTCTAAAATGAATTTTAAAGAAAGCATAAAAGTAATTCTATCATCAAGCTATT TGTGGCGAATTTGTTGTATGATTATCTCTTATAGTATTGTAATAAATATTATAGAAGGAGTATGGATGTCTAAGACTCAA GAGTTATATTCTACTACTGAACAATTTATGGCATATCAAGGTACAACTCTTATTTATACAGGAATAAGTTCAATAATATG TTCATTCTTAAGTTGTAGTATAATCTGTTATTTAGGATGGTATTGGGGAGCAGTTATTACACCAGTAATAATTTTAGTTA TTGGTACATGTTTTTTTAGCAGTATTGCACTTGAAAATTATCTTGTAGCAATAGTAAAAGATGGTATGTCTCCATTATCT ATTATTGTATTAATTGGAACTATACAAAATGTTTTAGCTAAAGGAGTAAAATACTCTGTATTTGATGCTACAAAGGAAAT GGCTTATATTCCACTTAATGATGAAATGAAAACTAAAGGCAAAGCAGCAGTTGAAGTTGCTGGAGCTAAAATTGGTAAAG CAGTTAGTAGTATTATGCAGTTTGCAATTTTTTCAATTATGCCATCTATCAAATATGATGATATTATTATATTCTTAACT ATATTCTTTATTATTGTATGTATAATTTGGATATTAAATGTAAAATTCTTACATAAAGATTATACTTTACTAGTAGCTAA TAATAAAAAATAA
Upstream 100 bases:
>100_bases ATTATTTGTCTTGACTCTATAAAGCTATAAAACAGCTATATCACTACACAATAAAATTAATAAGAATTTTGCAGCTTGAT AGCCTTCAAAAGAAAATGTT
Downstream 100 bases:
>100_bases ATAACTTTTTAGTTATATAATTAATATTATTTCCTAAAATTATTGTTTAATAATGCTTACTCAGGAAGATTTTAGAAATA AGTATCAATATCATCAGGCA
Product: ADP,ATP carrier protein homolog
Products: NA
Alternate protein names: ADP/ATP translocase 2 [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MFYIQSNLGLSYLQKLRNSKLRQILWPIRSPELMKFILMALLMFAVLLNQNVVRAIKNTIVTTQIGAESISFIKFWGEMP IGFLFIIFYSKLCNVVTAEKAFRIIVLSFLLFFAAYSFIILPNHTLFYPNPETVELYILRFPHFKWFIKMWGHWGDVLFY IIGELWPIVVFSLLYWQLANKITTTKEAGHFYPFLTLFGQSNLLISGNIVVYFSRENHILTKWFGSGLSKDELSIKSLMI IVILSTIIILLLHRLIETYIIHSLKNNSIRSSNNEYSKMNFKESIKVILSSSYLWRICCMIISYSIVINIIEGVWMSKTQ ELYSTTEQFMAYQGTTLIYTGISSIICSFLSCSIICYLGWYWGAVITPVIILVIGTCFFSSIALENYLVAIVKDGMSPLS IIVLIGTIQNVLAKGVKYSVFDATKEMAYIPLNDEMKTKGKAAVEVAGAKIGKAVSSIMQFAIFSIMPSIKYDDIIIFLT IFFIIVCIIWILNVKFLHKDYTLLVANNKK
Sequences:
>Translated_510_residues MFYIQSNLGLSYLQKLRNSKLRQILWPIRSPELMKFILMALLMFAVLLNQNVVRAIKNTIVTTQIGAESISFIKFWGEMP IGFLFIIFYSKLCNVVTAEKAFRIIVLSFLLFFAAYSFIILPNHTLFYPNPETVELYILRFPHFKWFIKMWGHWGDVLFY IIGELWPIVVFSLLYWQLANKITTTKEAGHFYPFLTLFGQSNLLISGNIVVYFSRENHILTKWFGSGLSKDELSIKSLMI IVILSTIIILLLHRLIETYIIHSLKNNSIRSSNNEYSKMNFKESIKVILSSSYLWRICCMIISYSIVINIIEGVWMSKTQ ELYSTTEQFMAYQGTTLIYTGISSIICSFLSCSIICYLGWYWGAVITPVIILVIGTCFFSSIALENYLVAIVKDGMSPLS IIVLIGTIQNVLAKGVKYSVFDATKEMAYIPLNDEMKTKGKAAVEVAGAKIGKAVSSIMQFAIFSIMPSIKYDDIIIFLT IFFIIVCIIWILNVKFLHKDYTLLVANNKK >Mature_510_residues MFYIQSNLGLSYLQKLRNSKLRQILWPIRSPELMKFILMALLMFAVLLNQNVVRAIKNTIVTTQIGAESISFIKFWGEMP IGFLFIIFYSKLCNVVTAEKAFRIIVLSFLLFFAAYSFIILPNHTLFYPNPETVELYILRFPHFKWFIKMWGHWGDVLFY IIGELWPIVVFSLLYWQLANKITTTKEAGHFYPFLTLFGQSNLLISGNIVVYFSRENHILTKWFGSGLSKDELSIKSLMI IVILSTIIILLLHRLIETYIIHSLKNNSIRSSNNEYSKMNFKESIKVILSSSYLWRICCMIISYSIVINIIEGVWMSKTQ ELYSTTEQFMAYQGTTLIYTGISSIICSFLSCSIICYLGWYWGAVITPVIILVIGTCFFSSIALENYLVAIVKDGMSPLS IIVLIGTIQNVLAKGVKYSVFDATKEMAYIPLNDEMKTKGKAAVEVAGAKIGKAVSSIMQFAIFSIMPSIKYDDIIIFLT IFFIIVCIIWILNVKFLHKDYTLLVANNKK
Specific function: Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism [H]
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP/ATP translocase tlc family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004667 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58467; Mature: 58467
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYIQSNLGLSYLQKLRNSKLRQILWPIRSPELMKFILMALLMFAVLLNQNVVRAIKNTI CEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VTTQIGAESISFIKFWGEMPIGFLFIIFYSKLCNVVTAEKAFRIIVLSFLLFFAAYSFII HEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE LPNHTLFYPNPETVELYILRFPHFKWFIKMWGHWGDVLFYIIGELWPIVVFSLLYWQLAN ECCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KITTTKEAGHFYPFLTLFGQSNLLISGNIVVYFSRENHILTKWFGSGLSKDELSIKSLMI HHCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECCCCEEHHHHCCCCCCCHHHHHHHHH IVILSTIIILLLHRLIETYIIHSLKNNSIRSSNNEYSKMNFKESIKVILSSSYLWRICCM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHCCHHHHHHHHH IISYSIVINIIEGVWMSKTQELYSTTEQFMAYQGTTLIYTGISSIICSFLSCSIICYLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH YWGAVITPVIILVIGTCFFSSIALENYLVAIVKDGMSPLSIIVLIGTIQNVLAKGVKYSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE FDATKEMAYIPLNDEMKTKGKAAVEVAGAKIGKAVSSIMQFAIFSIMPSIKYDDIIIFLT HHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH IFFIIVCIIWILNVKFLHKDYTLLVANNKK HHHHHHHHHHHHHHHHEECCEEEEEECCCC >Mature Secondary Structure MFYIQSNLGLSYLQKLRNSKLRQILWPIRSPELMKFILMALLMFAVLLNQNVVRAIKNTI CEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VTTQIGAESISFIKFWGEMPIGFLFIIFYSKLCNVVTAEKAFRIIVLSFLLFFAAYSFII HEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE LPNHTLFYPNPETVELYILRFPHFKWFIKMWGHWGDVLFYIIGELWPIVVFSLLYWQLAN ECCCEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KITTTKEAGHFYPFLTLFGQSNLLISGNIVVYFSRENHILTKWFGSGLSKDELSIKSLMI HHCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECCCCEEHHHHCCCCCCCHHHHHHHHH IVILSTIIILLLHRLIETYIIHSLKNNSIRSSNNEYSKMNFKESIKVILSSSYLWRICCM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHCCHHHHHHHHH IISYSIVINIIEGVWMSKTQELYSTTEQFMAYQGTTLIYTGISSIICSFLSCSIICYLGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH YWGAVITPVIILVIGTCFFSSIALENYLVAIVKDGMSPLSIIVLIGTIQNVLAKGVKYSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE FDATKEMAYIPLNDEMKTKGKAAVEVAGAKIGKAVSSIMQFAIFSIMPSIKYDDIIIFLT HHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH IFFIIVCIIWILNVKFLHKDYTLLVANNKK HHHHHHHHHHHHHHHHEECCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]