Click here to switch to the map view.

The map label for this gene is 189183304

Identifier: 189183304

GI number: 189183304

Start: 415996

End: 416820

Strand: Direct

Name: 189183304

Synonym: OTT_0397

Alternate gene names: NA

Gene position: 415996-416820 (Clockwise)

Preceding gene: 189183303

Following gene: 189183306

Centisome position: 20.71

GC content: 33.33

Gene sequence:

>825_bases
TTGCATAACGGAGTAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAAAGAGCTTAAAGTTATATTGCAA
TAATGAAGCAACTAAAAGCATTAACAGCTTAATAAATCAGCTCAGCAGACCAAATGAGAAATCAGCTAGCATAACTCTGA
AAACTGCTCATGATTTTGAGAAAGAACGGACAAAGCCAACTGTTTTTAGTAAAGTTGAAAACTGGTTTAAGTCTATAATC
AATGATATCAATGATAGATCTCATGTGAATGAAGAATATTATCATTTTACCGCTAAACCAGAGGAAGAAGCTAAAGTAGA
AAAAGTCCAGCAAGAGAATAGCATAAAGCAATGCACCACCAAAGATATTTCTACTCCATTGTTTATGCAAATCAAAGAAC
AAAGACAATATGATTATGATGTAACCATTCTGTCAGCAGAAGGAAAAACGATATCAAGTTTTCAGGAAGCTGGCATTGAT
AGCAGAATGGTATATAGCTCAAATGTAAATAATTTAAAGTATTATCAGCCATTTCAAGGAGAAAAGATTCTTATAGCTGC
AAATAATGATAAACAGAATAAAGAGTATGCAAGTACTATAAACAAGGCTGCAAAAGCATTAAAAAGCAAAGGAGCAATAA
CTAGCATCGTAGTTCCTTCAGAAGGTGAAGATTTTAACGAAATGCTAAAAAATAAAGGAGCAATAGCTGTTAAGGAGCTT
ATGATACCTGAAATCATGAAGTTAATTAATACTCAGAACGTAAAAACAGAGTCTGAACAAGTGGTGAAAACTGACATAGC
TCCAAAAATTGGCTTTAGACGGTAG

Upstream 100 bases:

>100_bases
GAAAAGAAGTGAGTTTTGATTCGGTAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGTCCAGGGAGCTT
CTATAAAAGATGTATACGTT

Downstream 100 bases:

>100_bases
TGCTGAAGATTTGAAACAAATAACTATATCAGGTTTCTATGTTAACTACTTCTTCTCCAGATAAACTACAGAAAAAACAT
TTTTTATCATTAACGTCAAT

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: Conjugative Transfer Protein TraI; MobA/MobL Family Protein; Conjugal Transfer Protein TraA; Conjugative Transfer Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MHNGVSNISSSYVAMTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSKVENWFKSII
NDINDRSHVNEEYYHFTAKPEEEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGID
SRMVYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYASTINKAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGFRR

Sequences:

>Translated_274_residues
MHNGVSNISSSYVAMTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSKVENWFKSII
NDINDRSHVNEEYYHFTAKPEEEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGID
SRMVYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYASTINKAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGFRR
>Mature_274_residues
MHNGVSNISSSYVAMTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSKVENWFKSII
NDINDRSHVNEEYYHFTAKPEEEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGID
SRMVYSSNVNNLKYYQPFQGEKILIAANNDKQNKEYASTINKAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31116; Mature: 31116

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNGVSNISSSYVAMTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFE
CCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHH
KERTKPTVFSKVENWFKSIINDINDRSHVNEEYYHFTAKPEEEAKVEKVQQENSIKQCTT
HHCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHH
KDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKYYQPFQG
HHCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCEEECCCCC
EKILIAANNDKQNKEYASTINKAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCHHHHHH
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGFRR
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHNGVSNISSSYVAMTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFE
CCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHH
KERTKPTVFSKVENWFKSIINDINDRSHVNEEYYHFTAKPEEEAKVEKVQQENSIKQCTT
HHCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHH
KDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKYYQPFQG
HHCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCEEECCCCC
EKILIAANNDKQNKEYASTINKAAKALKSKGAITSIVVPSEGEDFNEMLKNKGAIAVKEL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCHHHHHH
MIPEIMKLINTQNVKTESEQVVKTDIAPKIGFRR
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA