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The map label for this gene is yaaJ [C]

Identifier: 189026221

GI number: 189026221

Start: 1085918

End: 1087420

Strand: Reverse

Name: yaaJ [C]

Synonym: TPASS_0998

Alternate gene names: 189026221

Gene position: 1087420-1085918 (Counterclockwise)

Preceding gene: 189026224

Following gene: 189026220

Centisome position: 95.43

GC content: 50.53

Gene sequence:

>1503_bases
GTGAGGGGAGGAAACAGGCGCGACCCAATATCTTGTAACGGTAAGATGCTTTGCGTTACACTGGACGGGCGTGCTTTGSG
CCTATTTTACCCATTGAAGTTGGAAGGAATTTCCATGACCGCGTTTCAGGCGCTGCTTATCCGCCTTGTCGATGCTTTGC
ACTCCTATATCCTCGTCGGGTGGCTTGTCGTCTGCGGTGTCTTTTTTACCATAAAGACTGGCTGTGTTCAACTTAGTCTT
CTGAAGCCTGCGTTTGCAGCGCTGGCTGAAAAGAGGGGGAAAGGAGTTTCATCATTTCAAGCGCTTATGATTTCCACTGC
GAGCCGTGTGGGGGCTGGGAACATTGTCGGCGTTGCTACGGCTATCGCCTTTGGAGGAAAAGGGGCAGTGTTTTGGATGT
GGGTGAGTGCCTTTTTTGGCGCTGCAAGTGCCTTTGTCGAAAGTACGCTCGCCCAAGCATACAAAACGCGTACTGCGTGT
GGTTTTCGAGGTGGTCCCGCCTATTACATCGAAATGGGTCTGAAAAGTCGCTCCATGGGGGTGCTTTTTGCGCTGTGTCT
TGTCTTTGCATACGCGTACGGGTTCAATGCACTACAGGCTTATAATATTGTCTCTACTCTCTCTTACTACGGAAAGGATT
CTTCTCTGTGGGTCCAGATCCTAGCGGTGTTGCTGTCTTTTCTCCTTGCGTTTGTTATCTTTGGGGGGGTCGCGCGCATT
AGTGTTGTCAGTTCGGTGATAGTACCAGTGATGGCTGTGGGTTATGTTTTCCTCGGGCTGTGGGTGTTGGCACTCAATGT
GTACAGGCTCCCTGCGCTCTTTTTTGAAATTTGCCGGGAAGGACTGAGCCTCACGGCGTTTGCTGGTGGTACGTTCGGTT
CGGTGGTGGTCATTGGAATAAAGCGTGGCTTGCTGTCTCACGAGGCAGGAATGGGTTCGGCGCCTAACGCTGCAGCTTCT
GCAGAAGTGAGTCACCCGGTTGTGCAGGGCCTGGTGCAGGCACTCTCGGTGTTTATAGACACGATGCTAATTTGTAGTGT
GACTGCTTTTGTGTTGCTGCTCTCTGATGTTGCAGGATCAGTGGATGTGAGCGGAATGCAGTTCGTGCAGCAAGCGCTGT
CCAAGCAAGTTGGCCCCGTGGGGGTGCACTTGGTGACGCTTGCGATCTTTCTGTTTGCATTCAGTTCACTGATGGGTAAC
TATTACTACGCGGAGTCAAACGTACGTTTCATTAAGGACCATAAAATGGTTTTGAGTGTTTTCAGAGTTACCTGTGTCAG
TGCGGTATTTGTCGGTGCGCATGCGAGTTTTCATTTTGTTTGGGGTGTTGCGGATCTTTTTATGGTATTTATGACGGTCA
TCAACCTGATTGCTATCGTGACACTGCATCCGGTGGCGTTGTATCTACTGCGTGACTATCGCAAGCAATATCGTGCTGGG
AATGTGCCAGTCTTCTTTCAGGAACATTTGGTATTTCCTGAAAAGATGGCCTGCCGGGAGTAG

Upstream 100 bases:

>100_bases
ATAATTCTAGGTAAAGGGGATCGTTCCATGCATTGTCCTGAACAGTTAATCTGTTAGCTTGCACGCCCTGCAGGCTACCG
ACCCCGACAGAAGGAGCCGA

Downstream 100 bases:

>100_bases
ACGAGGCATAACACACATGAGGTGGAGGTTACAATGTACTCATTGAGAGTTCTCTTTAGGAGGCTGCTTCGTGGGTTAAA
TGCCGTTCGGTTGGTCAGTT

Product: sodium/proton-dependent alanine transporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MRGGNRRDPISCNGKMLCVTLDGRALXLFYPLKLEGISMTAFQALLIRLVDALHSYILVGWLVVCGVFFTIKTGCVQLSL
LKPAFAALAEKRGKGVSSFQALMISTASRVGAGNIVGVATAIAFGGKGAVFWMWVSAFFGAASAFVESTLAQAYKTRTAC
GFRGGPAYYIEMGLKSRSMGVLFALCLVFAYAYGFNALQAYNIVSTLSYYGKDSSLWVQILAVLLSFLLAFVIFGGVARI
SVVSSVIVPVMAVGYVFLGLWVLALNVYRLPALFFEICREGLSLTAFAGGTFGSVVVIGIKRGLLSHEAGMGSAPNAAAS
AEVSHPVVQGLVQALSVFIDTMLICSVTAFVLLLSDVAGSVDVSGMQFVQQALSKQVGPVGVHLVTLAIFLFAFSSLMGN
YYYAESNVRFIKDHKMVLSVFRVTCVSAVFVGAHASFHFVWGVADLFMVFMTVINLIAIVTLHPVALYLLRDYRKQYRAG
NVPVFFQEHLVFPEKMACRE

Sequences:

>Translated_500_residues
MRGGNRRDPISCNGKMLCVTLDGRALXLFYPLKLEGISMTAFQALLIRLVDALHSYILVGWLVVCGVFFTIKTGCVQLSL
LKPAFAALAEKRGKGVSSFQALMISTASRVGAGNIVGVATAIAFGGKGAVFWMWVSAFFGAASAFVESTLAQAYKTRTAC
GFRGGPAYYIEMGLKSRSMGVLFALCLVFAYAYGFNALQAYNIVSTLSYYGKDSSLWVQILAVLLSFLLAFVIFGGVARI
SVVSSVIVPVMAVGYVFLGLWVLALNVYRLPALFFEICREGLSLTAFAGGTFGSVVVIGIKRGLLSHEAGMGSAPNAAAS
AEVSHPVVQGLVQALSVFIDTMLICSVTAFVLLLSDVAGSVDVSGMQFVQQALSKQVGPVGVHLVTLAIFLFAFSSLMGN
YYYAESNVRFIKDHKMVLSVFRVTCVSAVFVGAHASFHFVWGVADLFMVFMTVINLIAIVTLHPVALYLLRDYRKQYRAG
NVPVFFQEHLVFPEKMACRE
>Mature_500_residues
MRGGNRRDPISCNGKMLCVTLDGRALXLFYPLKLEGISMTAFQALLIRLVDALHSYILVGWLVVCGVFFTIKTGCVQLSL
LKPAFAALAEKRGKGVSSFQALMISTASRVGAGNIVGVATAIAFGGKGAVFWMWVSAFFGAASAFVESTLAQAYKTRTAC
GFRGGPAYYIEMGLKSRSMGVLFALCLVFAYAYGFNALQAYNIVSTLSYYGKDSSLWVQILAVLLSFLLAFVIFGGVARI
SVVSSVIVPVMAVGYVFLGLWVLALNVYRLPALFFEICREGLSLTAFAGGTFGSVVVIGIKRGLLSHEAGMGSAPNAAAS
AEVSHPVVQGLVQALSVFIDTMLICSVTAFVLLLSDVAGSVDVSGMQFVQQALSKQVGPVGVHLVTLAIFLFAFSSLMGN
YYYAESNVRFIKDHKMVLSVFRVTCVSAVFVGAHASFHFVWGVADLFMVFMTVINLIAIVTLHPVALYLLRDYRKQYRAG
NVPVFFQEHLVFPEKMACRE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=451, Percent_Identity=37.6940133037694, Blast_Score=256, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 53895; Mature: 53895

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGNRRDPISCNGKMLCVTLDGRALXLFYPLKLEGISMTAFQALLIRLVDALHSYILVG
CCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
WLVVCGVFFTIKTGCVQLSLLKPAFAALAEKRGKGVSSFQALMISTASRVGAGNIVGVAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
AIAFGGKGAVFWMWVSAFFGAASAFVESTLAQAYKTRTACGFRGGPAYYIEMGLKSRSMG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH
VLFALCLVFAYAYGFNALQAYNIVSTLSYYGKDSSLWVQILAVLLSFLLAFVIFGGVARI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVSSVIVPVMAVGYVFLGLWVLALNVYRLPALFFEICREGLSLTAFAGGTFGSVVVIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHEEEEH
KRGLLSHEAGMGSAPNAAASAEVSHPVVQGLVQALSVFIDTMLICSVTAFVLLLSDVAGS
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VDVSGMQFVQQALSKQVGPVGVHLVTLAIFLFAFSSLMGNYYYAESNVRFIKDHKMVLSV
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHH
FRVTCVSAVFVGAHASFHFVWGVADLFMVFMTVINLIAIVTLHPVALYLLRDYRKQYRAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NVPVFFQEHLVFPEKMACRE
CCCEEHHHHCCCCHHHHCCC
>Mature Secondary Structure
MRGGNRRDPISCNGKMLCVTLDGRALXLFYPLKLEGISMTAFQALLIRLVDALHSYILVG
CCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
WLVVCGVFFTIKTGCVQLSLLKPAFAALAEKRGKGVSSFQALMISTASRVGAGNIVGVAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH
AIAFGGKGAVFWMWVSAFFGAASAFVESTLAQAYKTRTACGFRGGPAYYIEMGLKSRSMG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHH
VLFALCLVFAYAYGFNALQAYNIVSTLSYYGKDSSLWVQILAVLLSFLLAFVIFGGVARI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVVSSVIVPVMAVGYVFLGLWVLALNVYRLPALFFEICREGLSLTAFAGGTFGSVVVIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHEEEEH
KRGLLSHEAGMGSAPNAAASAEVSHPVVQGLVQALSVFIDTMLICSVTAFVLLLSDVAGS
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VDVSGMQFVQQALSKQVGPVGVHLVTLAIFLFAFSSLMGNYYYAESNVRFIKDHKMVLSV
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHHHHHHHH
FRVTCVSAVFVGAHASFHFVWGVADLFMVFMTVINLIAIVTLHPVALYLLRDYRKQYRAG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NVPVFFQEHLVFPEKMACRE
CCCEEHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]