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The map label for this gene is rsmI

Identifier: 189026198

GI number: 189026198

Start: 1059828

End: 1060652

Strand: Reverse

Name: rsmI

Synonym: TPASS_0975

Alternate gene names: 189026198

Gene position: 1060652-1059828 (Counterclockwise)

Preceding gene: 189026207

Following gene: 189026197

Centisome position: 93.08

GC content: 59.39

Gene sequence:

>825_bases
GTGGGTACCTTGTACGTGGTAGCAACGCCGATTGGAAACTTGGCAGACATCACCCTCCGTGCCTTAGATGTATTGCGAAC
GGTGGATGTAGTTGCCTGTGAAGACACGCGTAGGACGCGTGCGCTCCTGTCTCATTTTGGGATCCATAAGCGTCTTGTTT
CCTGTCGTGCACACAATGAGGCGCAGGCGGCGCGTCGACTCATCCATTTTTTGAGCACCCCTATTTCTGCTTTTCTCTCT
CCAGAGAAGGGGAGGGGCAGGCAGAGCGCGCGGCGCACGCGTGCACGTCCGGGTGAGACGGTAGGGACAGCTGCGCTGCA
GCTCGCTGCAGAAGCAACGGGGGAACAGGAAGTGTGTGGATCGCCGCACGCACAGGTAGCCTATGTTAGCGATGCAGGTA
CGCCGGGGGTCAGTGATCCGGGAGCGGTTTTAGTGCGCGCGGTGCGGGATGCTGGGCACACGGTGGTACCGATTCCCGGT
GCTTCTGCACTGACTACTTTGCTGAGTGTTGCAGGCGTGCGAGACAAGACCGTGCTATTCGAGGGGTTCCTTTCACCTCA
CCCGGGTCGTAGGCGTGCGCGCCTGGTGCAATTGTGCGCGCAGCGTGTAGCTTTTGTTCTGTACGAGAGTCCCTACCGGG
TTCAAAAGCTTCTAGAGGATCTGGTGGCGGTGGCGCCGGAGTCGCAGGTGGTGCTGGGTCGGGAATTGACCAAGGTGCAT
GAGGAGCTCTGTGTGGGGACTGCCTTGCGCGTCATGGAGAGCTTCTGTGCGCGGACGCGCGTGCGGGGGGAATGCGTGTT
GCTGGTTTCTGCAGAAAAATTTTAG

Upstream 100 bases:

>100_bases
GTCTCGGTTGACTCGGTTGTACGCTTTACCAAGTTTTTCTGAGTGAGCACCACCTGTTTCCTTGTTGCGCAAGGGAACAG
GTGGTGCGTAGGTTTGCGCG

Downstream 100 bases:

>100_bases
ATCTTTATTTTTCTTACAAATTTCCGATAATGGGGCGGGGGTGGGGCTCTTGTGATGATCGATAAGCTAAGTGGACTTGA
TCCGGTTCAGAACCTTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGTLYVVATPIGNLADITLRALDVLRTVDVVACEDTRRTRALLSHFGIHKRLVSCRAHNEAQAARRLIHFLSTPISAFLS
PEKGRGRQSARRTRARPGETVGTAALQLAAEATGEQEVCGSPHAQVAYVSDAGTPGVSDPGAVLVRAVRDAGHTVVPIPG
ASALTTLLSVAGVRDKTVLFEGFLSPHPGRRRARLVQLCAQRVAFVLYESPYRVQKLLEDLVAVAPESQVVLGRELTKVH
EELCVGTALRVMESFCARTRVRGECVLLVSAEKF

Sequences:

>Translated_274_residues
MGTLYVVATPIGNLADITLRALDVLRTVDVVACEDTRRTRALLSHFGIHKRLVSCRAHNEAQAARRLIHFLSTPISAFLS
PEKGRGRQSARRTRARPGETVGTAALQLAAEATGEQEVCGSPHAQVAYVSDAGTPGVSDPGAVLVRAVRDAGHTVVPIPG
ASALTTLLSVAGVRDKTVLFEGFLSPHPGRRRARLVQLCAQRVAFVLYESPYRVQKLLEDLVAVAPESQVVLGRELTKVH
EELCVGTALRVMESFCARTRVRGECVLLVSAEKF
>Mature_273_residues
GTLYVVATPIGNLADITLRALDVLRTVDVVACEDTRRTRALLSHFGIHKRLVSCRAHNEAQAARRLIHFLSTPISAFLSP
EKGRGRQSARRTRARPGETVGTAALQLAAEATGEQEVCGSPHAQVAYVSDAGTPGVSDPGAVLVRAVRDAGHTVVPIPGA
SALTTLLSVAGVRDKTVLFEGFLSPHPGRRRARLVQLCAQRVAFVLYESPYRVQKLLEDLVAVAPESQVVLGRELTKVHE
ELCVGTALRVMESFCARTRVRGECVLLVSAEKF

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family

Homologues:

Organism=Escherichia coli, GI1789535, Length=276, Percent_Identity=39.8550724637681, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMI_TREPA (O83940)

Other databases:

- EMBL:   AE000520
- PIR:   E71257
- RefSeq:   NP_219412.1
- ProteinModelPortal:   O83940
- GeneID:   2611232
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0975
- NMPDR:   fig|243276.1.peg.970
- TIGR:   TP_0975
- HOGENOM:   HBG529058
- OMA:   GREMTKI
- ProtClustDB:   CLSK218951
- BioCyc:   TPAL243276:TP_0975-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01877
- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063
- Gene3D:   G3DSA:3.40.1010.10
- TIGRFAMs:   TIGR00096

Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf

EC number: NA

Molecular weight: Translated: 29533; Mature: 29401

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS01296 RSMI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLYVVATPIGNLADITLRALDVLRTVDVVACEDTRRTRALLSHFGIHKRLVSCRAHNE
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AQAARRLIHFLSTPISAFLSPEKGRGRQSARRTRARPGETVGTAALQLAAEATGEQEVCG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCC
SPHAQVAYVSDAGTPGVSDPGAVLVRAVRDAGHTVVPIPGASALTTLLSVAGVRDKTVLF
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCHHHHH
EGFLSPHPGRRRARLVQLCAQRVAFVLYESPYRVQKLLEDLVAVAPESQVVLGRELTKVH
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EELCVGTALRVMESFCARTRVRGECVLLVSAEKF
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure 
GTLYVVATPIGNLADITLRALDVLRTVDVVACEDTRRTRALLSHFGIHKRLVSCRAHNE
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AQAARRLIHFLSTPISAFLSPEKGRGRQSARRTRARPGETVGTAALQLAAEATGEQEVCG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHCC
SPHAQVAYVSDAGTPGVSDPGAVLVRAVRDAGHTVVPIPGASALTTLLSVAGVRDKTVLF
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCHHHHH
EGFLSPHPGRRRARLVQLCAQRVAFVLYESPYRVQKLLEDLVAVAPESQVVLGRELTKVH
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EELCVGTALRVMESFCARTRVRGECVLLVSAEKF
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876