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The map label for this gene is traB

Identifier: 189026176

GI number: 189026176

Start: 1035304

End: 1036494

Strand: Reverse

Name: traB

Synonym: TPASS_0953

Alternate gene names: NA

Gene position: 1036494-1035304 (Counterclockwise)

Preceding gene: 189026177

Following gene: 189026175

Centisome position: 90.96

GC content: 56.09

Gene sequence:

>1191_bases
TTGAAAGTGGTTATGGATCACCAGCTGACGTGTCTTGAGTTCGGGTCTCGCCGTGTGGTGCTTATGGGGGTAGCCTGTAC
TTCTCAGGAAGCCATTGAGTGCGTGCGTCGCACGATTCGTGCGAGGCGTCCGCAGTGTGTGTGTGTGGAAGTGGACGATG
CGCGTGCGCAGGACCTCTTGGGGATGCGCCAGTGGCAGGAATATGACCTTGCGCGGGTTTTGCGTGAAGGGAAAGGCTTC
TTTCTCCTCAGTACTCTAGCCCTGTCTGCGTTTCAGAAACGTCTGAGTTCCGGTACTGGCGTAAGACTTGGGGATGAAGT
GAAAGCGGCAATTGAGGTGGCAGCGGAGCTTTCTGCCCAGGTAGCGTATATCGATCGGTCTATTGAGGTGACGCTCAGAC
GTGCCTGGCGCGTGTTAAATCCCTGGGGCCGAGCAAAGCTGCTGGCAGTGTTGCTGAGTGTGGCGTTTACTGGGGAACAG
TTGAGCGAGCAGCGCGTTGCGGTACTGTGTGCGCACGGCGCGATGGATGGGTTAATGCAAGAGATTATCTCGTTCCTACC
GGCGGTAAAGGGGGTATTGGTGGACGAGCGGAACCAATATCTGGCTTCCAAAATTTGGGCGGTGGACAGCCAAGTGGTAA
TGGCAGTAGTCAGCGCAGGGAGCGTGGCGGGTGTGCAACGGTGTTTGTACGAGTTTGCGTGCGGAGCACGCACGGCTGAA
GTGACGAATCTAGAAACGGTGGGTAGTTCTCCGCATGCGGGGCAGCTGTTAGGTTGGCTGTTTCCGTTGCTGCTGATGGG
GGTAGTGGTGACATGCTTTTTTGCTGGCGGCGTAGGCGCATCGCGCGATGCACTGATGCAGTGGCTATGGTGGAGCGGGA
GTATGACAGCACTGGGGGTGTTGTGTGCACTCGGACATCCGCTCAGCATAGTGGTGGGTTTTGTGGGGGCGCCAATTGCA
GTACTCACGCCGATAATCGGGGTGGGTTTGTTTACGGGTTTTGCGCAGGCGTGGGTGTGCCGGCCGCAAGTGGCGGATAT
GGAGCGCCTGGCGGACGATATTGTTACGTTCCGTGGCTGGTATCGTAATAAGTTTGCGCATGTACTGTTAGTGGTGGTGC
TTTCAAGCATAGGGGCAATGATTGGCAGTTTAATTTCAGTGCCGATGCTGCTGATGAATCTGTTTCGCTAA

Upstream 100 bases:

>100_bases
GTACGAATCCCTAGGCCGTCTTGGGCGCCACCGTGTGTGGGAGGGACAGTCGGCAAGGTGCGACTGGTTGATGGCGTGAG
TCTCGGGTAAAGGTTACCCT

Downstream 100 bases:

>100_bases
GTGACGGTAAGGACGTGCTGCAGCACGTGTAAAGTGATGGAGCAGTCACGGGCAAACGGAGCGGGCGTGTAAGCGGCGGC
GTTGCTATGCTTGTTTCTGT

Product: pheromone shutdown protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKVVMDHQLTCLEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLLGMRQWQEYDLARVLREGKGF
FLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYIDRSIEVTLRRAWRVLNPWGRAKLLAVLLSVAFTGEQ
LSEQRVAVLCAHGAMDGLMQEIISFLPAVKGVLVDERNQYLASKIWAVDSQVVMAVVSAGSVAGVQRCLYEFACGARTAE
VTNLETVGSSPHAGQLLGWLFPLLLMGVVVTCFFAGGVGASRDALMQWLWWSGSMTALGVLCALGHPLSIVVGFVGAPIA
VLTPIIGVGLFTGFAQAWVCRPQVADMERLADDIVTFRGWYRNKFAHVLLVVVLSSIGAMIGSLISVPMLLMNLFR

Sequences:

>Translated_396_residues
MKVVMDHQLTCLEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLLGMRQWQEYDLARVLREGKGF
FLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYIDRSIEVTLRRAWRVLNPWGRAKLLAVLLSVAFTGEQ
LSEQRVAVLCAHGAMDGLMQEIISFLPAVKGVLVDERNQYLASKIWAVDSQVVMAVVSAGSVAGVQRCLYEFACGARTAE
VTNLETVGSSPHAGQLLGWLFPLLLMGVVVTCFFAGGVGASRDALMQWLWWSGSMTALGVLCALGHPLSIVVGFVGAPIA
VLTPIIGVGLFTGFAQAWVCRPQVADMERLADDIVTFRGWYRNKFAHVLLVVVLSSIGAMIGSLISVPMLLMNLFR
>Mature_396_residues
MKVVMDHQLTCLEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLLGMRQWQEYDLARVLREGKGF
FLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQVAYIDRSIEVTLRRAWRVLNPWGRAKLLAVLLSVAFTGEQ
LSEQRVAVLCAHGAMDGLMQEIISFLPAVKGVLVDERNQYLASKIWAVDSQVVMAVVSAGSVAGVQRCLYEFACGARTAE
VTNLETVGSSPHAGQLLGWLFPLLLMGVVVTCFFAGGVGASRDALMQWLWWSGSMTALGVLCALGHPLSIVVGFVGAPIA
VLTPIIGVGLFTGFAQAWVCRPQVADMERLADDIVTFRGWYRNKFAHVLLVVVLSSIGAMIGSLISVPMLLMNLFR

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 43076; Mature: 43076

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVMDHQLTCLEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLL
CCEEECCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH
GMRQWQEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VAYIDRSIEVTLRRAWRVLNPWGRAKLLAVLLSVAFTGEQLSEQRVAVLCAHGAMDGLMQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIISFLPAVKGVLVDERNQYLASKIWAVDSQVVMAVVSAGSVAGVQRCLYEFACGARTAE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH
VTNLETVGSSPHAGQLLGWLFPLLLMGVVVTCFFAGGVGASRDALMQWLWWSGSMTALGV
HCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH
LCALGHPLSIVVGFVGAPIAVLTPIIGVGLFTGFAQAWVCRPQVADMERLADDIVTFRGW
HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YRNKFAHVLLVVVLSSIGAMIGSLISVPMLLMNLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVVMDHQLTCLEFGSRRVVLMGVACTSQEAIECVRRTIRARRPQCVCVEVDDARAQDLL
CCEEECCCHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHH
GMRQWQEYDLARVLREGKGFFLLSTLALSAFQKRLSSGTGVRLGDEVKAAIEVAAELSAQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VAYIDRSIEVTLRRAWRVLNPWGRAKLLAVLLSVAFTGEQLSEQRVAVLCAHGAMDGLMQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIISFLPAVKGVLVDERNQYLASKIWAVDSQVVMAVVSAGSVAGVQRCLYEFACGARTAE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH
VTNLETVGSSPHAGQLLGWLFPLLLMGVVVTCFFAGGVGASRDALMQWLWWSGSMTALGV
HCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH
LCALGHPLSIVVGFVGAPIAVLTPIIGVGLFTGFAQAWVCRPQVADMERLADDIVTFRGW
HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
YRNKFAHVLLVVVLSSIGAMIGSLISVPMLLMNLFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]