Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
---|---|
Accession | NC_010741 |
Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189026175
Identifier: 189026175
GI number: 189026175
Start: 1034185
End: 1035222
Strand: Reverse
Name: 189026175
Synonym: TPASS_0952
Alternate gene names: NA
Gene position: 1035222-1034185 (Counterclockwise)
Preceding gene: 189026176
Following gene: 189026174
Centisome position: 90.85
GC content: 48.94
Gene sequence:
>1038_bases TTGCTATGCTTGTTTCTGTGCGGGTGTGTGATGAAAAAATGGTGTGGGTTGGCATTTAGTATTTTCTTCTCGTTTTTCTT GCGTGCGCAGGATCTTACTTTCCAAGAAGTCTTCGAAGTGGCGGCGTGTAACGATGATGTCTCCCTTCTGAATAAAATGC ACAAGCGTACTGTGCGTGATAATCAGTTTGATGAGCAACTCACTGACCGAGTGCACCTGCGTTATCCTGCCTCGGTGTAT TATCCAGCGCATCAGGGTACGTATCCGCTTATCATGCTTTCGCACGGATGGAATAGCACGCAAGATTATCAGCGTGCGTT AGCGCGCTTTCTGGCTGCACAGGGATTTGTCACGGTGGTGTTTACGTCGCGAGCTCAGCGGCGGCCACCCGATTTTTTGA GTACGTTTGATAGTGTCTATGCACTTATGCAGCGCGTAAATGAGCAGGAGGGCTCTCCTCTGTATCGAAAGGTTGATTTT ACGCGTGTAGGGGTGTTGGGACACTCGATGGGTGGTACAGCTGCCCTGCACTATGCAAATCGGTACCCTGAGCGTATTCG AACGGTAGTTGCGTTGCATCCCTTTAACGGGGGCGCTGATATGGTGAACATGGTTGGGGGAAAAAACGAGCAACTGGGAA CTGATTTGCGCTCGGTACGTGCTGCGGTGCTGATTCTGACGGGAACAAAGGATATGTTGGCATATCCTGAACGGTCGTAT GAGTTCTTTCAGAGTTTACCACAGGATGTGCCTGCGTGCTTTTTGTCGCTAAAAGGTATGGGACATGGGGCGGGGACGGA TAAATATTTTGAAGTGTGGGGATTTACGTACAACAAAACGCTGAGTGTGGAATCGTTCGCGTTGTACCGTCGCCTGATAT CAGCCTGGTTTCGCCTTTTTTTGCGGGAAGAAGAGGAATATCGCGCCTTATTTAATGAACATGGGAGACCGTTCCGGAAT TTAAAGCCTCACTTATCGCAAGAAACAGGGCGCGCACACTCCTATCCCTTTTTCTGTGAGCAAAACATTTCGAATTAA
Upstream 100 bases:
>100_bases GATGAATCTGTTTCGCTAAGTGACGGTAAGGACGTGCTGCAGCACGTGTAAAGTGATGGAGCAGTCACGGGCAAACGGAG CGGGCGTGTAAGCGGCGGCG
Downstream 100 bases:
>100_bases AGGTGCTGACGCGGCTCCTCCCGAGGAGCCGGTTCCCCCTACAAGAGGGGATCTTGACGCCTCCGGTACCTTTGGTACAG AGTGGACCCTCGTGTTCTTA
Product: lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLCLFLCGCVMKKWCGLAFSIFFSFFLRAQDLTFQEVFEVAACNDDVSLLNKMHKRTVRDNQFDEQLTDRVHLRYPASVY YPAHQGTYPLIMLSHGWNSTQDYQRALARFLAAQGFVTVVFTSRAQRRPPDFLSTFDSVYALMQRVNEQEGSPLYRKVDF TRVGVLGHSMGGTAALHYANRYPERIRTVVALHPFNGGADMVNMVGGKNEQLGTDLRSVRAAVLILTGTKDMLAYPERSY EFFQSLPQDVPACFLSLKGMGHGAGTDKYFEVWGFTYNKTLSVESFALYRRLISAWFRLFLREEEEYRALFNEHGRPFRN LKPHLSQETGRAHSYPFFCEQNISN
Sequences:
>Translated_345_residues MLCLFLCGCVMKKWCGLAFSIFFSFFLRAQDLTFQEVFEVAACNDDVSLLNKMHKRTVRDNQFDEQLTDRVHLRYPASVY YPAHQGTYPLIMLSHGWNSTQDYQRALARFLAAQGFVTVVFTSRAQRRPPDFLSTFDSVYALMQRVNEQEGSPLYRKVDF TRVGVLGHSMGGTAALHYANRYPERIRTVVALHPFNGGADMVNMVGGKNEQLGTDLRSVRAAVLILTGTKDMLAYPERSY EFFQSLPQDVPACFLSLKGMGHGAGTDKYFEVWGFTYNKTLSVESFALYRRLISAWFRLFLREEEEYRALFNEHGRPFRN LKPHLSQETGRAHSYPFFCEQNISN >Mature_345_residues MLCLFLCGCVMKKWCGLAFSIFFSFFLRAQDLTFQEVFEVAACNDDVSLLNKMHKRTVRDNQFDEQLTDRVHLRYPASVY YPAHQGTYPLIMLSHGWNSTQDYQRALARFLAAQGFVTVVFTSRAQRRPPDFLSTFDSVYALMQRVNEQEGSPLYRKVDF TRVGVLGHSMGGTAALHYANRYPERIRTVVALHPFNGGADMVNMVGGKNEQLGTDLRSVRAAVLILTGTKDMLAYPERSY EFFQSLPQDVPACFLSLKGMGHGAGTDKYFEVWGFTYNKTLSVESFALYRRLISAWFRLFLREEEEYRALFNEHGRPFRN LKPHLSQETGRAHSYPFFCEQNISN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39663; Mature: 39663
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCLFLCGCVMKKWCGLAFSIFFSFFLRAQDLTFQEVFEVAACNDDVSLLNKMHKRTVRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC NQFDEQLTDRVHLRYPASVYYPAHQGTYPLIMLSHGWNSTQDYQRALARFLAAQGFVTVV CHHHHHHHCCEEEECCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE FTSRAQRRPPDFLSTFDSVYALMQRVNEQEGSPLYRKVDFTRVGVLGHSMGGTAALHYAN EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHH RYPERIRTVVALHPFNGGADMVNMVGGKNEQLGTDLRSVRAAVLILTGTKDMLAYPERSY HCHHHHEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCHHHHHCCCHHH EFFQSLPQDVPACFLSLKGMGHGAGTDKYFEVWGFTYNKTLSVESFALYRRLISAWFRLF HHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEECEEECCCCCHHHHHHHHHHHHHHHHHH LREEEEYRALFNEHGRPFRNLKPHLSQETGRAHSYPFFCEQNISN HCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLCLFLCGCVMKKWCGLAFSIFFSFFLRAQDLTFQEVFEVAACNDDVSLLNKMHKRTVRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC NQFDEQLTDRVHLRYPASVYYPAHQGTYPLIMLSHGWNSTQDYQRALARFLAAQGFVTVV CHHHHHHHCCEEEECCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE FTSRAQRRPPDFLSTFDSVYALMQRVNEQEGSPLYRKVDFTRVGVLGHSMGGTAALHYAN EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHH RYPERIRTVVALHPFNGGADMVNMVGGKNEQLGTDLRSVRAAVLILTGTKDMLAYPERSY HCHHHHEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCHHHHHCCCHHH EFFQSLPQDVPACFLSLKGMGHGAGTDKYFEVWGFTYNKTLSVESFALYRRLISAWFRLF HHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEECEEECCCCCHHHHHHHHHHHHHHHHHH LREEEEYRALFNEHGRPFRNLKPHLSQETGRAHSYPFFCEQNISN HCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA