Click here to switch to the map view.

The map label for this gene is 189026173

Identifier: 189026173

GI number: 189026173

Start: 1033622

End: 1033906

Strand: Reverse

Name: 189026173

Synonym: TPASS_0950

Alternate gene names: NA

Gene position: 1033906-1033622 (Counterclockwise)

Preceding gene: 189026174

Following gene: 189026172

Centisome position: 90.74

GC content: 55.79

Gene sequence:

>285_bases
TTGTGGCTGCCTCACGCGTTTCTTCGCGTTGTTTCACCGTCCGCGTTACGTTTGATGCCTGCGAACGGTTGCGCGGTTCC
TGCCGGGTGCGTGCAGTGTTCAAACAGGGACGTAGGTTTTGCTACGGGCGCGCGTGTCTTTTTGTGTTGCCAAACGGGTG
TGCGTATAGTCGGTTCCTTGCTACTTTTCGGCGCGGCTATGGAAAAGCCTCGCGCGCAATCGCGCACGACGGCTTTCAAA
AGAGGCGTATCGTGCACTCAAAAGTTCTCTCGTTCCAGGTTTTGA

Upstream 100 bases:

>100_bases
GCGCATGGCAACGCGTGGTGGGCGCGCGATACTCCGGCGTCGTCGTGCGAAGGGACGACGCAAGCTCACCGTTTCTGACG
AGAAAAAACCTTACTAGGCC

Downstream 100 bases:

>100_bases
TTTGGTCCTCTTGGTTTCCGTTGTGGAAGACAGCTTGCGGCGTATCAGCGGCTGCTGTGCGTGTTGTGTGATCGCGCGCG
TCTGTTCTCTGAATTTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MWLPHAFLRVVSPSALRLMPANGCAVPAGCVQCSNRDVGFATGARVFLCCQTGVRIVGSLLLFGAAMEKPRAQSRTTAFK
RGVSCTQKFSRSRF

Sequences:

>Translated_94_residues
MWLPHAFLRVVSPSALRLMPANGCAVPAGCVQCSNRDVGFATGARVFLCCQTGVRIVGSLLLFGAAMEKPRAQSRTTAFK
RGVSCTQKFSRSRF
>Mature_94_residues
MWLPHAFLRVVSPSALRLMPANGCAVPAGCVQCSNRDVGFATGARVFLCCQTGVRIVGSLLLFGAAMEKPRAQSRTTAFK
RGVSCTQKFSRSRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y950_TREPA (O83916)

Other databases:

- EMBL:   AE000520
- PIR:   D71261
- GenomeReviews:   AE000520_GR
- TIGR:   TP_0950
- HOGENOM:   HBG732172
- BioCyc:   TPAL243276:TP_0950-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10152; Mature: 10152

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLPHAFLRVVSPSALRLMPANGCAVPAGCVQCSNRDVGFATGARVFLCCQTGVRIVGSL
CCCCHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH
LLFGAAMEKPRAQSRTTAFKRGVSCTQKFSRSRF
HHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MWLPHAFLRVVSPSALRLMPANGCAVPAGCVQCSNRDVGFATGARVFLCCQTGVRIVGSL
CCCCHHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH
LLFGAAMEKPRAQSRTTAFKRGVSCTQKFSRSRF
HHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876