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The map label for this gene is oxaA [H]

Identifier: 189026172

GI number: 189026172

Start: 1031349

End: 1033346

Strand: Reverse

Name: oxaA [H]

Synonym: TPASS_0949

Alternate gene names: 189026172

Gene position: 1033346-1031349 (Counterclockwise)

Preceding gene: 189026173

Following gene: 189026171

Centisome position: 90.69

GC content: 51.3

Gene sequence:

>1998_bases
ATGTGTATGGGGTCTTTTTCTTACTGTAAAGAGAGTTGTACGTTGTCATCCTTTTGCTCGAGGTGGTTACGACCCAGTAC
CAACAAAGGACGTACTCCCATTGCAAACAGACGCGCAGGAGTGTTCGTGATGAAAAAAAATATGTTTATTGCAGTCGTAT
TGTCGGTGTTAGTGCTTGTGGGAGCTTCGTTCCTTCAGGAACTTTTGTATCCGTCTGCATCCTCCTCGCACTCTGCTGCG
GAACACACCCTGTCGGCCGTACCTGAGGAGACGCGCACTCAAAGTGCTCACGGGGGTGCAGCAGATACGCAAGAGACCAC
GCAGCCTGCTGCGCATCCTTCCGGCCAGGTGCTGGTGTTTCCCGAATCAGAAACTGAAGAGCGTGTAGAGCGCACGTATG
TGGTACGCACCCCGCTAGTGCAAGTGACGTTTACCAATCGTGGTGGAGATATTCTTTCGTATCAGTTGCGTGAGCACTAT
GCGGCGCAACGACGTGAGTACGTAGAAATGGTGGAACAGGCACGTCCAGACCATCGAGCTTTCTCGCTCGCGCTGGGGGA
CGAGTATGCTCCGAATGTGAATGCACTTTTCCAAGTAAAGCAGGAGATAGGCGCGCGTGGCGTGCATTCCATAGGTTTTT
ACCGCAGTGTTGCCACGCAGCATGCTGACGGTACACGGACTCCTTTCGTGCTGGCGAAGCGATACGTATTCTATCCTGAT
AATTATATGTTTGAGTTGCACGTTTCCCTGAGTGCAGACGTTCTAGAGGAGCGGGAAGACAGCCGGCAAGGGGCGAAGGT
GCGCGCGGTGGCGGAGACGAATGCTGGCCCAGCGACTACTGTTCTTGCGCGGGCGAATGGCTTTGACTTTGGGACAGCAA
GTTATACCCTGCGCACACCGCCTGAGATCGGGCCTGAGCGGAATGCGGCGGACAAGTATGAGTTTCGCACCTTCATGGTA
GGTGCAGGTGGCAAGGCGAAAACGTATGCTCTGAAAGGAGATGGACGTGAACAGGTAGATACGCCTGTCTCTTGGGCGAG
TGTCTCGGGTAAGTACTTTGCGCTCATCGTTTTGCCCAATGATGCGGACAGTCTGAAAAGACTAGTGCTATCGGCTCCCC
AAGCTGAAACAGCTGTGCAGCATCACATCGCGTTTGTGCGCCGCGCTGTTGCGCAGCCTGCGGTTGCAGATGTTTATCGT
GTGTACATCGGCCCGTGCGCAGAGCAGTATTTGAGTGCGTACAACGTTGCCTCTCGAAATCCCTATGGGCTTGAGCGCAC
GTATATCGATGCGGTGGCAGTAAGCGGTGGTATTCTCTATCCGCTTGAGGTGCTCCTTAAGTGGCTCCTGCGTTTGTTTT
ACACCCTCATTCCTAATTGGGGCGTGGCAATTATTTTGGTGACGATTGCAATAAAGGTGCTCTTTTTCCCGCTGACGAAA
AGGAGCTTTATCGCTATGCAAAAGATGCAAGAACTGCAGCCACACATGCAGCGTATCCAAGAGCGGTACAAAGGGAATAC
GCAGAAGATACATGAGGAAATGGCGAAACTCTACCGGGAAGCGCAGTACAATCCGCTTTCAGGCTGTCTCCCAACGCTTG
TACAGATGCCTATTATTTTTGCGATGTATCGGTTATTCAATAACTACTTCGAGTTCCGTGGTGCGATGTTTATCCCGTAT
TGGATTCCTGATCTTTCGTTGGCAGACAGCGTGTGGACACTGCCGTTCGCATTGCCGGTGACACAGTGGACTCAAATGCG
TATGCTGCCGGTTTTGTATGTAGTCTCTCAAATTATGTTTAGTAAGTTGACGCAGGTACCGCACACAGAGCAGCAAAAAA
CATCCATGACGATTATGACCTATGTGATGCCGTTGTTCTTTTTCTTTTTCTTTTATGATGCGCCCTCGGGTCTTCTAGTG
TATTGGACGGCAATGAACGGAGTGACGCTTGTACAGCAGTTGGTGATGAAGCGTACGGCTAACAAGAATAAAACCTGA

Upstream 100 bases:

>100_bases
TCCGTTTTTACCAGCGCGCTCTTTCCCCTCATCTTTTGCCTTCGTGCCGTTATTATCCGAGTTGCTCGCAGTATGCCTAT
GAGAGCGTGCGAGTACATGG

Downstream 100 bases:

>100_bases
TGCAGGAGTCGGTGTATGGTGTATGAGTTTGAAGGCAAGACAGAACAGGACGCCATTGCGCGTGCCGCTGCAGAGCTGGG
ATTGGGAGTAGATCAGTTTG

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MCMGSFSYCKESCTLSSFCSRWLRPSTNKGRTPIANRRAGVFVMKKNMFIAVVLSVLVLVGASFLQELLYPSASSSHSAA
EHTLSAVPEETRTQSAHGGAADTQETTQPAAHPSGQVLVFPESETEERVERTYVVRTPLVQVTFTNRGGDILSYQLREHY
AAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPD
NYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMV
GAGGKAKTYALKGDGREQVDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADVYR
VYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTK
RSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPY
WIPDLSLADSVWTLPFALPVTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLV
YWTAMNGVTLVQQLVMKRTANKNKT

Sequences:

>Translated_665_residues
MCMGSFSYCKESCTLSSFCSRWLRPSTNKGRTPIANRRAGVFVMKKNMFIAVVLSVLVLVGASFLQELLYPSASSSHSAA
EHTLSAVPEETRTQSAHGGAADTQETTQPAAHPSGQVLVFPESETEERVERTYVVRTPLVQVTFTNRGGDILSYQLREHY
AAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPD
NYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMV
GAGGKAKTYALKGDGREQVDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADVYR
VYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTK
RSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPY
WIPDLSLADSVWTLPFALPVTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLV
YWTAMNGVTLVQQLVMKRTANKNKT
>Mature_665_residues
MCMGSFSYCKESCTLSSFCSRWLRPSTNKGRTPIANRRAGVFVMKKNMFIAVVLSVLVLVGASFLQELLYPSASSSHSAA
EHTLSAVPEETRTQSAHGGAADTQETTQPAAHPSGQVLVFPESETEERVERTYVVRTPLVQVTFTNRGGDILSYQLREHY
AAQRREYVEMVEQARPDHRAFSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPD
NYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTPPEIGPERNAADKYEFRTFMV
GAGGKAKTYALKGDGREQVDTPVSWASVSGKYFALIVLPNDADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADVYR
VYIGPCAEQYLSAYNVASRNPYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTK
RSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPY
WIPDLSLADSVWTLPFALPVTQWTQMRMLPVLYVVSQIMFSKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLV
YWTAMNGVTLVQQLVMKRTANKNKT

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=222, Percent_Identity=38.2882882882883, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 74940; Mature: 74940

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCMGSFSYCKESCTLSSFCSRWLRPSTNKGRTPIANRRAGVFVMKKNMFIAVVLSVLVLV
CCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
GASFLQELLYPSASSSHSAAEHTLSAVPEETRTQSAHGGAADTQETTQPAAHPSGQVLVF
HHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
PESETEERVERTYVVRTPLVQVTFTNRGGDILSYQLREHYAAQRREYVEMVEQARPDHRA
CCCCHHHHHHHHEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
FSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPD
EEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCC
NYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTP
CEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCC
PEIGPERNAADKYEFRTFMVGAGGKAKTYALKGDGREQVDTPVSWASVSGKYFALIVLPN
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHCCCCCCCEECCCCEEEEEEECC
DADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADVYRVYIGPCAEQYLSAYNVASRN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTK
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
RSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AMYRLFNNYFEFRGAMFIPYWIPDLSLADSVWTLPFALPVTQWTQMRMLPVLYVVSQIMF
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCHHCCCHHHHHHHHHHHHHHHHHHHHH
SKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKRTA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHC
NKNKT
CCCCC
>Mature Secondary Structure
MCMGSFSYCKESCTLSSFCSRWLRPSTNKGRTPIANRRAGVFVMKKNMFIAVVLSVLVLV
CCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH
GASFLQELLYPSASSSHSAAEHTLSAVPEETRTQSAHGGAADTQETTQPAAHPSGQVLVF
HHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
PESETEERVERTYVVRTPLVQVTFTNRGGDILSYQLREHYAAQRREYVEMVEQARPDHRA
CCCCHHHHHHHHEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
FSLALGDEYAPNVNALFQVKQEIGARGVHSIGFYRSVATQHADGTRTPFVLAKRYVFYPD
EEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCC
NYMFELHVSLSADVLEEREDSRQGAKVRAVAETNAGPATTVLARANGFDFGTASYTLRTP
CEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCC
PEIGPERNAADKYEFRTFMVGAGGKAKTYALKGDGREQVDTPVSWASVSGKYFALIVLPN
CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHCCCCCCCEECCCCEEEEEEECC
DADSLKRLVLSAPQAETAVQHHIAFVRRAVAQPAVADVYRVYIGPCAEQYLSAYNVASRN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PYGLERTYIDAVAVSGGILYPLEVLLKWLLRLFYTLIPNWGVAIILVTIAIKVLFFPLTK
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCH
RSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLYREAQYNPLSGCLPTLVQMPIIF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AMYRLFNNYFEFRGAMFIPYWIPDLSLADSVWTLPFALPVTQWTQMRMLPVLYVVSQIMF
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCHHCCCHHHHHHHHHHHHHHHHHHHHH
SKLTQVPHTEQQKTSMTIMTYVMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKRTA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHC
NKNKT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]