Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026036
Identifier: 189026036
GI number: 189026036
Start: 881090
End: 881215
Strand: Reverse
Name: 189026036
Synonym: TPASS_0811
Alternate gene names: NA
Gene position: 881215-881090 (Counterclockwise)
Preceding gene: 189026037
Following gene: 189026031
Centisome position: 77.34
GC content: 44.44
Gene sequence:
>126_bases ATGGCGGGCATAGTATCTGCATTTGTTACGTTTTTCTACCGTTTTATATCTTTTACTACGTCATACGTGCAGTGTGTACG AAGCATTATCGCAGAGCACGCGGGTCCCCACGGATGGTTTTTATGA
Upstream 100 bases:
>100_bases GCCTAGGAAGCAGACTGCATTTTGAGATCCAAAGTGCTGGGCACAGTGTCTGAGTGCCGCTTCAAAGGTAAGATGTGGCA CGGTTCCCCTTCGACTGTAC
Downstream 100 bases:
>100_bases CCGTAAAACTTCTGTAGTGGCATTAAACGCCGCAATACGCGATGCGATACGGCCAGGAGAGTGCAGAAAGCTACGGTGTA GCCGTGTCAGCGCAGGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MAGIVSAFVTFFYRFISFTTSYVQCVRSIIAEHAGPHGWFL
Sequences:
>Translated_41_residues MAGIVSAFVTFFYRFISFTTSYVQCVRSIIAEHAGPHGWFL >Mature_40_residues AGIVSAFVTFFYRFISFTTSYVQCVRSIIAEHAGPHGWFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y811_TREPA (O83788)
Other databases:
- EMBL: AE000520 - PIR: A71278 - RefSeq: NP_219248.1 - ProteinModelPortal: O83788 - GeneID: 2610879 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0811 - NMPDR: fig|243276.1.peg.807 - TIGR: TP_0811 - HOGENOM: HBG251070 - ProtClustDB: CLSK2300307 - BioCyc: TPAL243276:TP_0811-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4658; Mature: 4527
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIVSAFVTFFYRFISFTTSYVQCVRSIIAEHAGPHGWFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AGIVSAFVTFFYRFISFTTSYVQCVRSIIAEHAGPHGWFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876