Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026037

Identifier: 189026037

GI number: 189026037

Start: 882626

End: 883912

Strand: Reverse

Name: 189026037

Synonym: TPASS_0813

Alternate gene names: NA

Gene position: 883912-882626 (Counterclockwise)

Preceding gene: 189026040

Following gene: 189026036

Centisome position: 77.57

GC content: 55.01

Gene sequence:

>1287_bases
ATGGGCGCGGCTACGACGGGGTTTCCCATAAAGGCTGCAGTCATACACTTCACCGCTCTTAGCAGACATGAACAGTATAT
CGTCTCGCGCGCGCTGTGTGCTTTGCGCACGCAGCCTCGGCGTGCGCAGGTTGTACGCCGGCGCGTGTCTAATTTAAAAC
GTCTGGTCCGTGCTATGCGTTCGTACTCAGGTGCAGATGGTGCGGACGTAGAAAGGTTTGGAAAGGGAACGGTGACAGAC
CTGGCCGATGCAGGAAGGTTCCTCTTTTTACCTGCACGTGTGGCGCTTAGGCGTGGGTACCTGATTGCTAAAATCCAAAC
CTTTGCGTTTCTTACGCAGGAGGTAACGCGGGTAGCTCTAGCTGAGTACCTGGTGCAGGAGTTGCGCCAGGTGCAGTTTG
CACTCGTGTGTATGCTCATGACAGAGGATCTATACCTCTCTCTAATGGAGCAGGAGCACGTACCCGCGCGTTTGAAGACT
GCTGTTACGCATGCGCTCGTAGCGCTGTGGGAACAGCGTCCGGATGAACGTGCGCGGCGCGCTACGTCGGCACTGCATCA
GGTGTGGTGTGCACGGGAGCACTTGGCCCCTAGCTTTGGCTCAATGCTCGGTTCTAGTGAGTTGTTTTTGCTCTCGACAG
AGCTAGACGAGATGTGGCGCGACTTTTTAGTGCAGCGCTTGAGCGAAGCAGGAGTTTGTACCGCACTAGAGGAGTTCCTG
TTTGGTATTTCACATGAGCAGATCCAAGCCATTCGCTTGCAATTGCGTGCGCAGGGGGTTGCGGCACTGAGCCGTCAGGA
AGCATACGCCCTGATCGGGGAAAAGGGCGGGGGAGAAAACACGCAGGCGCACGCATACCAGCGTGTAGCTGATCTGTGCT
CCTTTTATAGGTCGTTTATAATACGCAAAAGAGATGCCCAGGCGCGACTACGCCTAAATATGCCTGGACCTGTACGAACC
ATCGAAGAACACTACGTGGAGTACCTTTTTTTCCGTCAGGGGAAGCCTGTTTTGTACATTAACGTGCGAGCTGCGCCTTC
TACAAAGAGTTTTCCTTTAGGAAAGGTGTGTCGCGTCGAGACAAGCGGTCAGCACCTACTGTTTTTTCATACTCCATCAC
CCGAAGCGTCCCCACGCGCACCTGCGTGGAAAGCTGGGTGCGCAAAAAGCACACTATCTGAGGGTGCCGTATTCGTTCGG
CTCCTTGTTTTACCCATACGGCGCAGTGCGCTTGCCCTTGCGTGTCTACGCGCACGTGTGCGTGCACCACGCACGGATGT
TGCATAA

Upstream 100 bases:

>100_bases
TGCGTGCGCCTGTCATTCTCAGCGGTTAGGCCCTTCCTTTCCCTTGGTTTGTAGGGAGGTCATTCTAGTAATTCGTGTCA
GAATACATTAGACTCACGCC

Downstream 100 bases:

>100_bases
GCACACAAACAAGATCCTCTGCGTACACCGCTTCTCCGCGCGCACCGAGTTGCATATGGCACGAGCTGCTGCAGGGGAGG
AGATTACCGGTTTCTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MGAATTGFPIKAAVIHFTALSRHEQYIVSRALCALRTQPRRAQVVRRRVSNLKRLVRAMRSYSGADGADVERFGKGTVTD
LADAGRFLFLPARVALRRGYLIAKIQTFAFLTQEVTRVALAEYLVQELRQVQFALVCMLMTEDLYLSLMEQEHVPARLKT
AVTHALVALWEQRPDERARRATSALHQVWCAREHLAPSFGSMLGSSELFLLSTELDEMWRDFLVQRLSEAGVCTALEEFL
FGISHEQIQAIRLQLRAQGVAALSRQEAYALIGEKGGGENTQAHAYQRVADLCSFYRSFIIRKRDAQARLRLNMPGPVRT
IEEHYVEYLFFRQGKPVLYINVRAAPSTKSFPLGKVCRVETSGQHLLFFHTPSPEASPRAPAWKAGCAKSTLSEGAVFVR
LLVLPIRRSALALACLRARVRAPRTDVA

Sequences:

>Translated_428_residues
MGAATTGFPIKAAVIHFTALSRHEQYIVSRALCALRTQPRRAQVVRRRVSNLKRLVRAMRSYSGADGADVERFGKGTVTD
LADAGRFLFLPARVALRRGYLIAKIQTFAFLTQEVTRVALAEYLVQELRQVQFALVCMLMTEDLYLSLMEQEHVPARLKT
AVTHALVALWEQRPDERARRATSALHQVWCAREHLAPSFGSMLGSSELFLLSTELDEMWRDFLVQRLSEAGVCTALEEFL
FGISHEQIQAIRLQLRAQGVAALSRQEAYALIGEKGGGENTQAHAYQRVADLCSFYRSFIIRKRDAQARLRLNMPGPVRT
IEEHYVEYLFFRQGKPVLYINVRAAPSTKSFPLGKVCRVETSGQHLLFFHTPSPEASPRAPAWKAGCAKSTLSEGAVFVR
LLVLPIRRSALALACLRARVRAPRTDVA
>Mature_427_residues
GAATTGFPIKAAVIHFTALSRHEQYIVSRALCALRTQPRRAQVVRRRVSNLKRLVRAMRSYSGADGADVERFGKGTVTDL
ADAGRFLFLPARVALRRGYLIAKIQTFAFLTQEVTRVALAEYLVQELRQVQFALVCMLMTEDLYLSLMEQEHVPARLKTA
VTHALVALWEQRPDERARRATSALHQVWCAREHLAPSFGSMLGSSELFLLSTELDEMWRDFLVQRLSEAGVCTALEEFLF
GISHEQIQAIRLQLRAQGVAALSRQEAYALIGEKGGGENTQAHAYQRVADLCSFYRSFIIRKRDAQARLRLNMPGPVRTI
EEHYVEYLFFRQGKPVLYINVRAAPSTKSFPLGKVCRVETSGQHLLFFHTPSPEASPRAPAWKAGCAKSTLSEGAVFVRL
LVLPIRRSALALACLRARVRAPRTDVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y813_TREPA (O83789)

Other databases:

- EMBL:   AE000520
- PIR:   B71278
- RefSeq:   NP_219249.1
- ProteinModelPortal:   O83789
- IntAct:   O83789
- GeneID:   2610886
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0813
- NMPDR:   fig|243276.1.peg.808
- TIGR:   TP_0813
- HOGENOM:   HBG251071
- ProtClustDB:   CLSK218877
- BioCyc:   TPAL243276:TP_0813-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48023; Mature: 47892

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAATTGFPIKAAVIHFTALSRHEQYIVSRALCALRTQPRRAQVVRRRVSNLKRLVRAMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SYSGADGADVERFGKGTVTDLADAGRFLFLPARVALRRGYLIAKIQTFAFLTQEVTRVAL
HCCCCCCCCHHHHCCCCHHHHHHCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AEYLVQELRQVQFALVCMLMTEDLYLSLMEQEHVPARLKTAVTHALVALWEQRPDERARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
ATSALHQVWCAREHLAPSFGSMLGSSELFLLSTELDEMWRDFLVQRLSEAGVCTALEEFL
HHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHH
FGISHEQIQAIRLQLRAQGVAALSRQEAYALIGEKGGGENTQAHAYQRVADLCSFYRSFI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IRKRDAQARLRLNMPGPVRTIEEHYVEYLFFRQGKPVLYINVRAAPSTKSFPLGKVCRVE
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEE
TSGQHLLFFHTPSPEASPRAPAWKAGCAKSTLSEGAVFVRLLVLPIRRSALALACLRARV
CCCCEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPRTDVA
CCCCCCCC
>Mature Secondary Structure 
GAATTGFPIKAAVIHFTALSRHEQYIVSRALCALRTQPRRAQVVRRRVSNLKRLVRAMR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SYSGADGADVERFGKGTVTDLADAGRFLFLPARVALRRGYLIAKIQTFAFLTQEVTRVAL
HCCCCCCCCHHHHCCCCHHHHHHCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AEYLVQELRQVQFALVCMLMTEDLYLSLMEQEHVPARLKTAVTHALVALWEQRPDERARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
ATSALHQVWCAREHLAPSFGSMLGSSELFLLSTELDEMWRDFLVQRLSEAGVCTALEEFL
HHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHH
FGISHEQIQAIRLQLRAQGVAALSRQEAYALIGEKGGGENTQAHAYQRVADLCSFYRSFI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IRKRDAQARLRLNMPGPVRTIEEHYVEYLFFRQGKPVLYINVRAAPSTKSFPLGKVCRVE
HHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEEE
TSGQHLLFFHTPSPEASPRAPAWKAGCAKSTLSEGAVFVRLLVLPIRRSALALACLRARV
CCCCEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPRTDVA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876