Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025825
Identifier: 189025825
GI number: 189025825
Start: 652362
End: 653018
Strand: Reverse
Name: 189025825
Synonym: TPASS_0599
Alternate gene names: NA
Gene position: 653018-652362 (Counterclockwise)
Preceding gene: 189025826
Following gene: 189025824
Centisome position: 57.31
GC content: 48.1
Gene sequence:
>657_bases GTGATGCAGTTACGGTGTGCGTGTGAGCGGGTGTTCGATATTGAACATGAGACGGTAATTTCGCTTGATGAGCACCCGGA ATTTGTTGCGCGTATACAGCAGGGGGATTTTTTAAGTTACCAGTGTCCGGCATGTGGTGCGCGTATTCGTGCCGAAATAA AAACAGAATTTGTGTGGCATGCGAAGAATGTGCATTTGCTTTTGGTTCCTGAGCGAGAGCGTTTGCGGTGTTTGGCTTTT TGTGCCGGTATGCATATGAGCGACGGAGATAGTGCTGACTTTTGTGAACCCTTTGTCTTACGGGAGCACCAGACACCCGT GATTGGCTACGCAGAACTTGCTGATCGTGTTGCAATACTAGCATGGGATTTGAACCCTGAAATTGTTGAAGCAGTAAAGT TTTTTGTGTTGGAAGGGGCACCGCATCTAGGAGACAAGAGAGTTTCGTGTTTTTTTGAACGTTGTGTCGGGGACACCGGA TCGCGCGTGATGGAGTTGCACGTGTACGGTATCAGAGAACAACAAACGGCAATTATGCCGGTTCCCATGAATGTGTATGA ACGCGTTGAGCGAGAGCGAGGTAAACAAGCGGAGTTGTTTGAGGCGCTGTATGTTGGGGCGTATCTTTCATACAAGAATG TTTTTACTGACGCGTAG
Upstream 100 bases:
>100_bases TGTGTTGTACTATCTGCAGTTTGTAGGTTTTGCGTTTGTTGCATTGATATTTTTATGTGCGTTTTGGAACGACGTGAATT TTTTGTTTCACTAGGAGTGA
Downstream 100 bases:
>100_bases CSCCGCACAGCGAGCAGCATCTGGTGTGCGTGGTGTATGGGGTGTTGTACGCTTGGGCTTTTTGCAGACAGTGTAGAGAA GCGCGCAGCGAAGGATGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWHAKNVHLLLVPERERLRCLAF CAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAILAWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTG SRVMELHVYGIREQQTAIMPVPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA
Sequences:
>Translated_218_residues MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWHAKNVHLLLVPERERLRCLAF CAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAILAWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTG SRVMELHVYGIREQQTAIMPVPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA >Mature_218_residues MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWHAKNVHLLLVPERERLRCLAF CAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAILAWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTG SRVMELHVYGIREQQTAIMPVPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y599_TREPA (O83608)
Other databases:
- EMBL: AE000520 - PIR: A71304 - RefSeq: NP_219037.1 - ProteinModelPortal: O83608 - GeneID: 2611216 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0599 - NMPDR: fig|243276.1.peg.596 - TIGR: TP_0599 - HOGENOM: HBG732062 - OMA: QNIFTEG - ProtClustDB: CLSK218779 - BioCyc: TPAL243276:TP_0599-MONOMER - GO: GO:0005622 - InterPro: IPR015880 - SMART: SM00355
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24978; Mature: 24978
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWH CCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEEEEE AKNVHLLLVPERERLRCLAFCAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAIL ECCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHCCEEEE AWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTGSRVMELHVYGIREQQTAIMP EECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE VPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMQLRCACERVFDIEHETVISLDEHPEFVARIQQGDFLSYQCPACGARIRAEIKTEFVWH CCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEEEEE AKNVHLLLVPERERLRCLAFCAGMHMSDGDSADFCEPFVLREHQTPVIGYAELADRVAIL ECCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHCCEEEE AWDLNPEIVEAVKFFVLEGAPHLGDKRVSCFFERCVGDTGSRVMELHVYGIREQQTAIMP EECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEE VPMNVYERVERERGKQAELFEALYVGAYLSYKNVFTDA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876