Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025824

Identifier: 189025824

GI number: 189025824

Start: 650262

End: 652325

Strand: Reverse

Name: 189025824

Synonym: TPASS_0598

Alternate gene names: NA

Gene position: 652325-650262 (Counterclockwise)

Preceding gene: 189025825

Following gene: 189025823

Centisome position: 57.25

GC content: 50.82

Gene sequence:

>2064_bases
ATGGGGTGTTGTACGCTTGGGCTTTTTGCAGACAGTGTAGAGAAGCGCGCAGCGAAGGATGTGTTTACTGAACCGGCGCG
CTTTTATCCCTCACAAAAATCAACGCTTGAATCTGCCCGGTCTGATACATCTGAATCTGAGAATGCATCTTCTTCCGTTC
CTTCCCACAGTCAGCAGGAGTTGGCGCCAGACTCTGCCGCGCCTGCGCGTAACTCTGTGTTGTCCCCTGCTCCTCCTGAA
AGGAGAGAGAAGCAGGGGGCTGCGGTGCATGGGGCGGAAGTGACGCGGGCGGGAGCTGTCAGCCCGCGTTTTGTAGGGGG
GCTGACAAAAATACTGGCCGCCTCTGACCATACATTCTTCGCTGCAGGAAATGATGGGTTTCTCACCCAGTACACGTATC
CGGATTATAAACCGGATACGTGGCAGATCACCCCTGTTTCTATCAAACACTGTGCAGTGCATCCGGACCGCGCGCGTATT
GCCGTATATGAAACAGATGGACGCAATTACCACCGAGTCAGTGTGTGGAATTGGCGCACGAAAGAAATACTTTTTGCAAA
GCGTTTTACCGCATCGGTTGTGTCACTCTCGTGGATTGTGCAGGGAAGTTTTTTGAGTGTGGGAACAGCATCGCGCGAAG
GTGTGACGGTGTTAGATGGGAGTGGAAATACAGTTTCTCTATTTTCGGAAGAGCCTGGGGTGGTGTTGTTGACTGCGAGT
GGACCGCGCCTTGTGCTCAGTTATGCAGAATCTGGACGCCTCACGTACGTAGATTACAGCAAAAAGACAACCGTCAAACG
TCTTCTTACCGAAAAGAATCTCCTGTCTCCCATGTTAATACATAACGGTGCACATCTTGTCGGTTATAGAGACCAACGTG
TGTATGTCATCCAGTCTTCAAGTGGCGCGGTGCTCACCGAGTACCCTGCACGGAGTGCATGTTTTGCGCATACATTCAGC
GATAGTCTTCCTGTGTGGATAGAGCCTGCTGAGTTGAAGTATCACTGGCGTATACGGAAAGCTGCGCAGCGTTCTGCTGA
TTTTATGCTTCCTGACAATGCTCGCATAACAAGTGCGTGCTCGGTTCGCACGCGGGTCATCGTAGGAACCGATCGCGGGA
TCCTCTATGAATTGCAGCAGGGAGATGACAGGCGCGTAACTATCCGCGCACTCAATGGCGAGCGTCAGATATACGCAAGC
GATGTACATGGTGCAGATGAGGGCGCGTATTTTTTAGCAGACGGATCCCTATATCACAGCATGGCGTCCGGGGGACCGTA
TCGTGTTTTGGTGCGCGGAGTAAAAGGAACTCGGTTTCTGCCTTATCGTGATGGTTTTATTGTGTGGTCTGCAGGGAAAG
AAACAGAGTTTCTTCATTGTGCGCAAAAGACGAGTCAACACAGGATGATATATCGCGCGCGTTCCACGGTAAGCGGCGTG
TCGGTGTATGGGCGTATGTTGGTGATTACTGAACCTTTCTCTGGAGTATCGGTGGTGGATATTGAGCGGGGGATACGAGT
TTTTTTTCACAAAGCGATTGGTATGCAGGATTCGCTATTGATTACTGATGACGTAATTGTAGCCACTCAAAGCGGTTTGC
AGCCACTTGTCCTGCTGCATATGCGTACGGGGGAGACATATACGCATGCGGTGGGAGGCGATTTTGCCTTTGGCGTCCGC
GCGCATGATACACAGCATGTATATTTTTTTTCGTTGGATACGAATGCGGGCACGACTGATTTGATCCATCTTCGTCTGCA
ACTGCAGCAACCCACAGAAAGTGTTGTGCGACGCATCCTCTCTTATAAGGATGAGGATATAGATGCGCATATGGTGATGC
GGCGTTCACTGTTGGTAACTAATTTAGGAAAAGGGGCGCTTGTCGGACATCGCGTGCAACAGTCGCAGGTGTATCGTATG
TCCCGTGCGTATGCGTTACCAAAAGTTGCTGCAATCACGTCGAACGGAGTTGTCAGCGTGAATTACGATGGTTCAGTTTC
GTGGTATGAAGGCGACGGTGCGACATTGAAAGCAACCGAATTTATCCGGACCGAAGATTTTTGA

Upstream 100 bases:

>100_bases
GTTGTTTGAGGCGCTGTATGTTGGGGCGTATCTTTCATACAAGAATGTTTTTACTGACGCGTAGCSCCGCACAGCGAGCA
GCATCTGGTGTGCGTGGTGT

Downstream 100 bases:

>100_bases
ACGGGTACACAAGGTGCGGTGTATTTTGTAATTCGGCACGGTGGTATGAATGCTTCCTAGTTGGTCTTGACAGGGAGCTC
CTTCTCGGGGGAGGATGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MGCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQELAPDSAAPARNSVLSPAPPE
RREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFFAAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARI
AVYETDGRNYHRVSVWNWRTKEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS
GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSSSGAVLTEYPARSACFAHTFS
DSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSACSVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYAS
DVHGADEGAYFLADGSLYHSMASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV
SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLHMRTGETYTHAVGGDFAFGVR
AHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRILSYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRM
SRAYALPKVAAITSNGVVSVNYDGSVSWYEGDGATLKATEFIRTEDF

Sequences:

>Translated_687_residues
MGCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQELAPDSAAPARNSVLSPAPPE
RREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFFAAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARI
AVYETDGRNYHRVSVWNWRTKEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS
GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSSSGAVLTEYPARSACFAHTFS
DSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSACSVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYAS
DVHGADEGAYFLADGSLYHSMASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV
SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLHMRTGETYTHAVGGDFAFGVR
AHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRILSYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRM
SRAYALPKVAAITSNGVVSVNYDGSVSWYEGDGATLKATEFIRTEDF
>Mature_686_residues
GCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQELAPDSAAPARNSVLSPAPPER
REKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFFAAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARIA
VYETDGRNYHRVSVWNWRTKEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTASG
PRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSSSGAVLTEYPARSACFAHTFSD
SLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSACSVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYASD
VHGADEGAYFLADGSLYHSMASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGVS
VYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLHMRTGETYTHAVGGDFAFGVRA
HDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRILSYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRMS
RAYALPKVAAITSNGVVSVNYDGSVSWYEGDGATLKATEFIRTEDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR015943 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75794; Mature: 75663

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQE
CCEEEEEHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LAPDSAAPARNSVLSPAPPERREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFF
CCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCEEECCCCCCHHHHHHHHHHCCCCCEEE
AAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARIAVYETDGRNYHRVSVWNWRT
EECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
KEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS
HHEEEEHHHHHHHEEEEEEEECCEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEECC
GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSS
CCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCEEEEEECC
SGAVLTEYPARSACFAHTFSDSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSAC
CCCEEEECCCCCCEEEEECCCCCCEEEECCCEEEEEEEHHHHHCCCCEECCCCCCEEEEE
SVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYASDVHGADEGAYFLADGSLYHS
CEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCHHHHH
MASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV
HHCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEEEEHHCCCCCE
SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLH
EEEEEEEEEECCCCCCEEEEHHHCCEEEHHHHCCCCCCEEEECCEEEEECCCCCEEEEEE
MRTGETYTHAVGGDFAFGVRAHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRIL
EECCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
SYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRMSRAYALPKVAAITSNGVVSV
CCCCCCCCHHHHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHCCCEEEEEECCCEEEE
NYDGSVSWYEGDGATLKATEFIRTEDF
ECCCEEEEEECCCCEEEEEEEEECCCC
>Mature Secondary Structure 
GCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQE
CEEEEEHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
LAPDSAAPARNSVLSPAPPERREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFF
CCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCEEECCCCCCHHHHHHHHHHCCCCCEEE
AAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARIAVYETDGRNYHRVSVWNWRT
EECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC
KEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS
HHEEEEHHHHHHHEEEEEEEECCEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEECC
GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSS
CCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCEEEEEECC
SGAVLTEYPARSACFAHTFSDSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSAC
CCCEEEECCCCCCEEEEECCCCCCEEEECCCEEEEEEEHHHHHCCCCEECCCCCCEEEEE
SVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYASDVHGADEGAYFLADGSLYHS
CEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCHHHHH
MASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV
HHCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEEEEHHCCCCCE
SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLH
EEEEEEEEEECCCCCCEEEEHHHCCEEEHHHHCCCCCCEEEECCEEEEECCCCCEEEEEE
MRTGETYTHAVGGDFAFGVRAHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRIL
EECCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHH
SYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRMSRAYALPKVAAITSNGVVSV
CCCCCCCCHHHHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHCCCEEEEEECCCEEEE
NYDGSVSWYEGDGATLKATEFIRTEDF
ECCCEEEEEECCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]