Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025824
Identifier: 189025824
GI number: 189025824
Start: 650262
End: 652325
Strand: Reverse
Name: 189025824
Synonym: TPASS_0598
Alternate gene names: NA
Gene position: 652325-650262 (Counterclockwise)
Preceding gene: 189025825
Following gene: 189025823
Centisome position: 57.25
GC content: 50.82
Gene sequence:
>2064_bases ATGGGGTGTTGTACGCTTGGGCTTTTTGCAGACAGTGTAGAGAAGCGCGCAGCGAAGGATGTGTTTACTGAACCGGCGCG CTTTTATCCCTCACAAAAATCAACGCTTGAATCTGCCCGGTCTGATACATCTGAATCTGAGAATGCATCTTCTTCCGTTC CTTCCCACAGTCAGCAGGAGTTGGCGCCAGACTCTGCCGCGCCTGCGCGTAACTCTGTGTTGTCCCCTGCTCCTCCTGAA AGGAGAGAGAAGCAGGGGGCTGCGGTGCATGGGGCGGAAGTGACGCGGGCGGGAGCTGTCAGCCCGCGTTTTGTAGGGGG GCTGACAAAAATACTGGCCGCCTCTGACCATACATTCTTCGCTGCAGGAAATGATGGGTTTCTCACCCAGTACACGTATC CGGATTATAAACCGGATACGTGGCAGATCACCCCTGTTTCTATCAAACACTGTGCAGTGCATCCGGACCGCGCGCGTATT GCCGTATATGAAACAGATGGACGCAATTACCACCGAGTCAGTGTGTGGAATTGGCGCACGAAAGAAATACTTTTTGCAAA GCGTTTTACCGCATCGGTTGTGTCACTCTCGTGGATTGTGCAGGGAAGTTTTTTGAGTGTGGGAACAGCATCGCGCGAAG GTGTGACGGTGTTAGATGGGAGTGGAAATACAGTTTCTCTATTTTCGGAAGAGCCTGGGGTGGTGTTGTTGACTGCGAGT GGACCGCGCCTTGTGCTCAGTTATGCAGAATCTGGACGCCTCACGTACGTAGATTACAGCAAAAAGACAACCGTCAAACG TCTTCTTACCGAAAAGAATCTCCTGTCTCCCATGTTAATACATAACGGTGCACATCTTGTCGGTTATAGAGACCAACGTG TGTATGTCATCCAGTCTTCAAGTGGCGCGGTGCTCACCGAGTACCCTGCACGGAGTGCATGTTTTGCGCATACATTCAGC GATAGTCTTCCTGTGTGGATAGAGCCTGCTGAGTTGAAGTATCACTGGCGTATACGGAAAGCTGCGCAGCGTTCTGCTGA TTTTATGCTTCCTGACAATGCTCGCATAACAAGTGCGTGCTCGGTTCGCACGCGGGTCATCGTAGGAACCGATCGCGGGA TCCTCTATGAATTGCAGCAGGGAGATGACAGGCGCGTAACTATCCGCGCACTCAATGGCGAGCGTCAGATATACGCAAGC GATGTACATGGTGCAGATGAGGGCGCGTATTTTTTAGCAGACGGATCCCTATATCACAGCATGGCGTCCGGGGGACCGTA TCGTGTTTTGGTGCGCGGAGTAAAAGGAACTCGGTTTCTGCCTTATCGTGATGGTTTTATTGTGTGGTCTGCAGGGAAAG AAACAGAGTTTCTTCATTGTGCGCAAAAGACGAGTCAACACAGGATGATATATCGCGCGCGTTCCACGGTAAGCGGCGTG TCGGTGTATGGGCGTATGTTGGTGATTACTGAACCTTTCTCTGGAGTATCGGTGGTGGATATTGAGCGGGGGATACGAGT TTTTTTTCACAAAGCGATTGGTATGCAGGATTCGCTATTGATTACTGATGACGTAATTGTAGCCACTCAAAGCGGTTTGC AGCCACTTGTCCTGCTGCATATGCGTACGGGGGAGACATATACGCATGCGGTGGGAGGCGATTTTGCCTTTGGCGTCCGC GCGCATGATACACAGCATGTATATTTTTTTTCGTTGGATACGAATGCGGGCACGACTGATTTGATCCATCTTCGTCTGCA ACTGCAGCAACCCACAGAAAGTGTTGTGCGACGCATCCTCTCTTATAAGGATGAGGATATAGATGCGCATATGGTGATGC GGCGTTCACTGTTGGTAACTAATTTAGGAAAAGGGGCGCTTGTCGGACATCGCGTGCAACAGTCGCAGGTGTATCGTATG TCCCGTGCGTATGCGTTACCAAAAGTTGCTGCAATCACGTCGAACGGAGTTGTCAGCGTGAATTACGATGGTTCAGTTTC GTGGTATGAAGGCGACGGTGCGACATTGAAAGCAACCGAATTTATCCGGACCGAAGATTTTTGA
Upstream 100 bases:
>100_bases GTTGTTTGAGGCGCTGTATGTTGGGGCGTATCTTTCATACAAGAATGTTTTTACTGACGCGTAGCSCCGCACAGCGAGCA GCATCTGGTGTGCGTGGTGT
Downstream 100 bases:
>100_bases ACGGGTACACAAGGTGCGGTGTATTTTGTAATTCGGCACGGTGGTATGAATGCTTCCTAGTTGGTCTTGACAGGGAGCTC CTTCTCGGGGGAGGATGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MGCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQELAPDSAAPARNSVLSPAPPE RREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFFAAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARI AVYETDGRNYHRVSVWNWRTKEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSSSGAVLTEYPARSACFAHTFS DSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSACSVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYAS DVHGADEGAYFLADGSLYHSMASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLHMRTGETYTHAVGGDFAFGVR AHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRILSYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRM SRAYALPKVAAITSNGVVSVNYDGSVSWYEGDGATLKATEFIRTEDF
Sequences:
>Translated_687_residues MGCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQELAPDSAAPARNSVLSPAPPE RREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFFAAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARI AVYETDGRNYHRVSVWNWRTKEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSSSGAVLTEYPARSACFAHTFS DSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSACSVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYAS DVHGADEGAYFLADGSLYHSMASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLHMRTGETYTHAVGGDFAFGVR AHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRILSYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRM SRAYALPKVAAITSNGVVSVNYDGSVSWYEGDGATLKATEFIRTEDF >Mature_686_residues GCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQELAPDSAAPARNSVLSPAPPER REKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFFAAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARIA VYETDGRNYHRVSVWNWRTKEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTASG PRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSSSGAVLTEYPARSACFAHTFSD SLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSACSVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYASD VHGADEGAYFLADGSLYHSMASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGVS VYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLHMRTGETYTHAVGGDFAFGVRA HDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRILSYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRMS RAYALPKVAAITSNGVVSVNYDGSVSWYEGDGATLKATEFIRTEDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011048 - InterPro: IPR015943 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75794; Mature: 75663
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQE CCEEEEEHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LAPDSAAPARNSVLSPAPPERREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFF CCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCEEECCCCCCHHHHHHHHHHCCCCCEEE AAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARIAVYETDGRNYHRVSVWNWRT EECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC KEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS HHEEEEHHHHHHHEEEEEEEECCEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEECC GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSS CCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCEEEEEECC SGAVLTEYPARSACFAHTFSDSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSAC CCCEEEECCCCCCEEEEECCCCCCEEEECCCEEEEEEEHHHHHCCCCEECCCCCCEEEEE SVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYASDVHGADEGAYFLADGSLYHS CEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCHHHHH MASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV HHCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEEEEHHCCCCCE SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLH EEEEEEEEEECCCCCCEEEEHHHCCEEEHHHHCCCCCCEEEECCEEEEECCCCCEEEEEE MRTGETYTHAVGGDFAFGVRAHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRIL EECCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHH SYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRMSRAYALPKVAAITSNGVVSV CCCCCCCCHHHHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHCCCEEEEEECCCEEEE NYDGSVSWYEGDGATLKATEFIRTEDF ECCCEEEEEECCCCEEEEEEEEECCCC >Mature Secondary Structure GCCTLGLFADSVEKRAAKDVFTEPARFYPSQKSTLESARSDTSESENASSSVPSHSQQE CEEEEEHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LAPDSAAPARNSVLSPAPPERREKQGAAVHGAEVTRAGAVSPRFVGGLTKILAASDHTFF CCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCEEECCCCCCHHHHHHHHHHCCCCCEEE AAGNDGFLTQYTYPDYKPDTWQITPVSIKHCAVHPDRARIAVYETDGRNYHRVSVWNWRT EECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCC KEILFAKRFTASVVSLSWIVQGSFLSVGTASREGVTVLDGSGNTVSLFSEEPGVVLLTAS HHEEEEHHHHHHHEEEEEEEECCEEEECCCCCCCEEEECCCCCEEEEEECCCCEEEEECC GPRLVLSYAESGRLTYVDYSKKTTVKRLLTEKNLLSPMLIHNGAHLVGYRDQRVYVIQSS CCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCCEEEEEECCEEEEEECC SGAVLTEYPARSACFAHTFSDSLPVWIEPAELKYHWRIRKAAQRSADFMLPDNARITSAC CCCEEEECCCCCCEEEEECCCCCCEEEECCCEEEEEEEHHHHHCCCCEECCCCCCEEEEE SVRTRVIVGTDRGILYELQQGDDRRVTIRALNGERQIYASDVHGADEGAYFLADGSLYHS CEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCHHHHH MASGGPYRVLVRGVKGTRFLPYRDGFIVWSAGKETEFLHCAQKTSQHRMIYRARSTVSGV HHCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHCCCCEEEEEHHCCCCCE SVYGRMLVITEPFSGVSVVDIERGIRVFFHKAIGMQDSLLITDDVIVATQSGLQPLVLLH EEEEEEEEEECCCCCCEEEEHHHCCEEEHHHHCCCCCCEEEECCEEEEECCCCCEEEEEE MRTGETYTHAVGGDFAFGVRAHDTQHVYFFSLDTNAGTTDLIHLRLQLQQPTESVVRRIL EECCCEEEEECCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEECCCHHHHHHHHH SYKDEDIDAHMVMRRSLLVTNLGKGALVGHRVQQSQVYRMSRAYALPKVAAITSNGVVSV CCCCCCCCHHHHHHHHHHEEECCCCCEEECHHHHHHHHHHHHHHCCCEEEEEECCCEEEE NYDGSVSWYEGDGATLKATEFIRTEDF ECCCEEEEEECCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]