Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025821
Identifier: 189025821
GI number: 189025821
Start: 647747
End: 648355
Strand: Reverse
Name: 189025821
Synonym: TPASS_0594
Alternate gene names: NA
Gene position: 648355-647747 (Counterclockwise)
Preceding gene: 189025822
Following gene: 189025818
Centisome position: 56.9
GC content: 52.22
Gene sequence:
>609_bases ATGGTACCTGCTTTTTTGCAGGTCGTATTTCCCCTTGTTGGTTGTGCGCATTATATTTTGTGGGGGCGGGCTATGAGAAA GGTTATCGTATATGGTGTCGTACTGTGTCTGTGTGTGCCGTGTTTCACAGCAAGCTCGGACAAGGCAGCGCAGGTGCCGT CTGTGCAGAAGGAAATGGCCGATCCGGTGGAAGGTATCTGGAAGAGCGTTGATGACAATACAGGGAAACCCACTGGGGTG TGGCGGTTGTATGTTCAGGATGGTAAGCTCTTTGGCAAGATCCTCGTGTGCATGGGGAGGGCTCCGAATGCGGCGGTGGT TTCGTGTACAAGAACGTATCCTGATTTCCCCAAGAAGGGAAACGTCGCCAATATGCCCTTGGTTGGTACGCCCTTCATCT ATAACCTCGAGCGTACTTCTCCAGGCTCCTGGGGTGGTGGATACGTAATAGATCCTGCAAGCGGTAAGTACTATTACTGC AAAATTAATTTCATCCCTGCGGATGGGAGGAGCTACAAGGTTGATACGCTGCAGATGCGCGGGGAAATCAGCTGGGGGAT TGGGCAGAAGCCAGTACTGGCTCAGGTCTTCCCAGACGGAAGTCGATGA
Upstream 100 bases:
>100_bases TTCTCTTAATGGTGCTCCGCCGATATCGGATGTAGTGTTGGAGTTTCAAGAGCGTTTTGCACAATCACGGTGAGCTCGAT GTATGTGGGGGGTGCGTCGT
Downstream 100 bases:
>100_bases GCTCATAAAAACCAACGTGGTGGCGCACACGTTCGTGCCTGCTTCCGAGTAAGAGGACCGGCTCCACCGGCGGAAAGATA TGTTCTTCAGTACAGTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVPAFLQVVFPLVGCAHYILWGRAMRKVIVYGVVLCLCVPCFTASSDKAAQVPSVQKEMADPVEGIWKSVDDNTGKPTGV WRLYVQDGKLFGKILVCMGRAPNAAVVSCTRTYPDFPKKGNVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYC KINFIPADGRSYKVDTLQMRGEISWGIGQKPVLAQVFPDGSR
Sequences:
>Translated_202_residues MVPAFLQVVFPLVGCAHYILWGRAMRKVIVYGVVLCLCVPCFTASSDKAAQVPSVQKEMADPVEGIWKSVDDNTGKPTGV WRLYVQDGKLFGKILVCMGRAPNAAVVSCTRTYPDFPKKGNVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYC KINFIPADGRSYKVDTLQMRGEISWGIGQKPVLAQVFPDGSR >Mature_202_residues MVPAFLQVVFPLVGCAHYILWGRAMRKVIVYGVVLCLCVPCFTASSDKAAQVPSVQKEMADPVEGIWKSVDDNTGKPTGV WRLYVQDGKLFGKILVCMGRAPNAAVVSCTRTYPDFPKKGNVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYC KINFIPADGRSYKVDTLQMRGEISWGIGQKPVLAQVFPDGSR
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22108; Mature: 22108
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAFLQVVFPLVGCAHYILWGRAMRKVIVYGVVLCLCVPCFTASSDKAAQVPSVQKEMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHC DPVEGIWKSVDDNTGKPTGVWRLYVQDGKLFGKILVCMGRAPNAAVVSCTRTYPDFPKKG CHHHHHHHHCCCCCCCCCEEEEEEEECCHHHEEHHHEECCCCCCEEEEEECCCCCCCCCC NVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYCKINFIPADGRSYKVDTLQMR CCCCCCEECCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEC GEISWGIGQKPVLAQVFPDGSR CEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure MVPAFLQVVFPLVGCAHYILWGRAMRKVIVYGVVLCLCVPCFTASSDKAAQVPSVQKEMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHC DPVEGIWKSVDDNTGKPTGVWRLYVQDGKLFGKILVCMGRAPNAAVVSCTRTYPDFPKKG CHHHHHHHHCCCCCCCCCEEEEEEEECCHHHEEHHHEECCCCCCEEEEEECCCCCCCCCC NVANMPLVGTPFIYNLERTSPGSWGGGYVIDPASGKYYYCKINFIPADGRSYKVDTLQMR CCCCCCEECCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCEEEEEEEEEC GEISWGIGQKPVLAQVFPDGSR CEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA