The gene/protein map for NC_010718 is currently unavailable.
Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is pdxK [C]

Identifier: 188586561

GI number: 188586561

Start: 2056539

End: 2057423

Strand: Reverse

Name: pdxK [C]

Synonym: Nther_1948

Alternate gene names: 188586561

Gene position: 2057423-2056539 (Counterclockwise)

Preceding gene: 188586562

Following gene: 188586560

Centisome position: 64.99

GC content: 38.87

Gene sequence:

>885_bases
ATGTCGAAAAGAACAGTTAAGAGAGTTGCAGCAATCCACGACCTGGCAGGATTTGGTCGATCTTCTCTAGCTGTAGTAGT
GCCAATTATTTCTACCATGGGAAGTCAGGTTTGTTCAGTGCCAACAGCTGTATTATCAACACATACTGGAGGTTTTGAGG
AATATAGTTTTGTTGATCTGACGGAAAATATGGTAGATTTTTTTGGCCACTGGAAAAAACTTAATTTAGAATTTGATTGT
ATATATAGTGGTTTCTTAGGGTCTCCTCGACAGGTAGATATAATATCAGATTTTATTGACAACTTTGCAGTTAGGAATGG
ATATGAAGACACTTTAGTGGTAGTAGATCCAGTAATGGCTGATGACGGACAGTTGTACAGTACCATGGATGAAACCATGG
TGAAAAGAATGCGTGATTTGGTCGCTAAAGCGGATATTATCACACCTAATTTTACGGAAGCATGTTTTTTATTGGATGAA
CCTTATGATACTAAAGCCGACAAAGATACCATAAAAGATTGGTTATACAAACTTTCTCAAATGGGGCCAGAAAAGGTGAT
TATTACCAGTGCTCCTGCTGAAGATCCTCATAAGACTAATGTGGTGGCATATAATAGAGAAGATGGTCGCTATTGGAAAG
TTAGCTGTGATTATATCCCTGCCCATTACCCTGGAACGGGAGATGCTTTTACTAGTGTCATTGTTGGAAGTCTGTTACAG
GGGGATAACTTACCAATATCCTTAGATCGGGGAGTGCAATTTATAACTGCTGCAATTAGAGCCAGCTATGGTGAAACACT
CCCTAAAAGGGAAGGCGTTTTACTAGAGCGAGTTTTAGGTAATTTAAAAATGCCTGTTTTAGTAGGTAGTTACGAGCTTC
TATAA

Upstream 100 bases:

>100_bases
TATGTTTAAAACACAAAGGATTTTTATTTTTGTTGTCGAAATTACCCTATCAGAAAAGATAAATAAACTATATACCATCT
AGCGTAATGGAGGGATTTAA

Downstream 100 bases:

>100_bases
AAGAAGCTCGTAACTTATACTGTGGCCCATCGACCTACAGTTTTTGCAGCACTTTTACTTTTATAAAATCTTTTGAAAAT
CCGATAATAATAGAGTTCCT

Product: pyridoxamine kinase

Products: ADP; pyridoxal 5'-phosphate

Alternate protein names: Pyridoxamine Kinase; Pyridoxine Kinase; Pyridoxal/Pyridoxine/Pyridoxamine Kinase; Phosphomethylpyrimidine Kinase; Pyridoxine Kinase Family Protein; Pyridoxal Kinase-Like Protein; Pyridoxal Kinase Related Protein; Pyridoxal/Pyridoxine/Pyridoxamine Kinase-Like Protein; Pyridoxamine Kinase PdxY

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSKRTVKRVAAIHDLAGFGRSSLAVVVPIISTMGSQVCSVPTAVLSTHTGGFEEYSFVDLTENMVDFFGHWKKLNLEFDC
IYSGFLGSPRQVDIISDFIDNFAVRNGYEDTLVVVDPVMADDGQLYSTMDETMVKRMRDLVAKADIITPNFTEACFLLDE
PYDTKADKDTIKDWLYKLSQMGPEKVIITSAPAEDPHKTNVVAYNREDGRYWKVSCDYIPAHYPGTGDAFTSVIVGSLLQ
GDNLPISLDRGVQFITAAIRASYGETLPKREGVLLERVLGNLKMPVLVGSYELL

Sequences:

>Translated_294_residues
MSKRTVKRVAAIHDLAGFGRSSLAVVVPIISTMGSQVCSVPTAVLSTHTGGFEEYSFVDLTENMVDFFGHWKKLNLEFDC
IYSGFLGSPRQVDIISDFIDNFAVRNGYEDTLVVVDPVMADDGQLYSTMDETMVKRMRDLVAKADIITPNFTEACFLLDE
PYDTKADKDTIKDWLYKLSQMGPEKVIITSAPAEDPHKTNVVAYNREDGRYWKVSCDYIPAHYPGTGDAFTSVIVGSLLQ
GDNLPISLDRGVQFITAAIRASYGETLPKREGVLLERVLGNLKMPVLVGSYELL
>Mature_293_residues
SKRTVKRVAAIHDLAGFGRSSLAVVVPIISTMGSQVCSVPTAVLSTHTGGFEEYSFVDLTENMVDFFGHWKKLNLEFDCI
YSGFLGSPRQVDIISDFIDNFAVRNGYEDTLVVVDPVMADDGQLYSTMDETMVKRMRDLVAKADIITPNFTEACFLLDEP
YDTKADKDTIKDWLYKLSQMGPEKVIITSAPAEDPHKTNVVAYNREDGRYWKVSCDYIPAHYPGTGDAFTSVIVGSLLQG
DNLPISLDRGVQFITAAIRASYGETLPKREGVLLERVLGNLKMPVLVGSYELL

Specific function: Phosphorylates B6 Vitamers; Functions In A Salvage Pathway. Uses Pyridoxal, Pyridoxine, And Pyridoxamine As Substrates. [C]

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.35

Molecular weight: Translated: 32602; Mature: 32470

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRTVKRVAAIHDLAGFGRSSLAVVVPIISTMGSQVCSVPTAVLSTHTGGFEEYSFVDL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCHHHHHHCCCCCCCCCEEHHH
TENMVDFFGHWKKLNLEFDCIYSGFLGSPRQVDIISDFIDNFAVRNGYEDTLVVVDPVMA
HHHHHHHHHCCEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEC
DDGQLYSTMDETMVKRMRDLVAKADIITPNFTEACFLLDEPYDTKADKDTIKDWLYKLSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
MGPEKVIITSAPAEDPHKTNVVAYNREDGRYWKVSCDYIPAHYPGTGDAFTSVIVGSLLQ
CCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHC
GDNLPISLDRGVQFITAAIRASYGETLPKREGVLLERVLGNLKMPVLVGSYELL
CCCCCEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEECCEECC
>Mature Secondary Structure 
SKRTVKRVAAIHDLAGFGRSSLAVVVPIISTMGSQVCSVPTAVLSTHTGGFEEYSFVDL
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCHHHHHHCCCCCCCCCEEHHH
TENMVDFFGHWKKLNLEFDCIYSGFLGSPRQVDIISDFIDNFAVRNGYEDTLVVVDPVMA
HHHHHHHHHCCEEECEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEC
DDGQLYSTMDETMVKRMRDLVAKADIITPNFTEACFLLDEPYDTKADKDTIKDWLYKLSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
MGPEKVIITSAPAEDPHKTNVVAYNREDGRYWKVSCDYIPAHYPGTGDAFTSVIVGSLLQ
CCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHC
GDNLPISLDRGVQFITAAIRASYGETLPKREGVLLERVLGNLKMPVLVGSYELL
CCCCCEEHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; pyridoxal

Specific reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA