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The map label for this gene is rex

Identifier: 188586478

GI number: 188586478

Start: 1949515

End: 1950174

Strand: Reverse

Name: rex

Synonym: Nther_1863

Alternate gene names: 188586478

Gene position: 1950174-1949515 (Counterclockwise)

Preceding gene: 188586480

Following gene: 188586477

Centisome position: 61.61

GC content: 37.73

Gene sequence:

>660_bases
ATGAATCAACGGGGAGAAGCGCCGATTTCAGTGATTAAAAGATTGCCGGTTTATTTAAGGGTACTTGATAATCTAGTAAA
ACGTGACATTGAAGTTGTGTCTTCCAAAAGTTTGAGTAAGGAAACTGGCTTTACAGCAGAACAAATTAGAAAGGATTTAG
CTTTTTTTGGAGCCTTTGGTACCCGAGGGACTGGATACAATACCAACTATTTACGAGAAAGAGTTCTGAGAATCATCGGC
TTAGATAAACAAACTAATGTTGCTATAGTAGGTGCAGGACACTTGGGAACTGCATTTGCAAGGTATAACGTGAGAGAAAA
CCCGTATACAAGTGTAGTAGGACTTTTTGACGTCAGTCCTGACATAGTTGGAGAAAATATTGAAGGGGTACCTGTATATC
ATTTGAATGATTTACAGGAAATAGTAAGAAAAGAACGTGTTCAAGTAGGTGTAATTACTGTTCCAGCTGTTCACGCTCAG
GAAGTAGTTGACCGTCTTGTAGAAGAAAATGTAAAAGCTCTTTTGAACTTTGCACCTGCTAAATTAACTGCTCCTGAAGA
TGTGAGGATTCACAATGTTGATTTGACTATTGAGCTGCAAAGTTTGATTTATTTTGCAAAAGATGAGCTGAATGAAGAGA
GTACTCAAGATTTGGAATAA

Upstream 100 bases:

>100_bases
TTGCTCACTAAATCTGATAATATATACTGGGGGATAATAACAATTAACACAATTATTGAAAATAGTTATATATTATTCTT
TAACAATAAGGAGGCTAAAC

Downstream 100 bases:

>100_bases
TAATTTGGATTTTTTTAAAGAAAGCTATTGACTTTAGGGTAATGGTTATGTATAATTTAAAAGTGCCGACGATGAGAGGC
AAAACTTAATAAACACGCGG

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNQRGEAPISVIKRLPVYLRVLDNLVKRDIEVVSSKSLSKETGFTAEQIRKDLAFFGAFGTRGTGYNTNYLRERVLRIIG
LDKQTNVAIVGAGHLGTAFARYNVRENPYTSVVGLFDVSPDIVGENIEGVPVYHLNDLQEIVRKERVQVGVITVPAVHAQ
EVVDRLVEENVKALLNFAPAKLTAPEDVRIHNVDLTIELQSLIYFAKDELNEESTQDLE

Sequences:

>Translated_219_residues
MNQRGEAPISVIKRLPVYLRVLDNLVKRDIEVVSSKSLSKETGFTAEQIRKDLAFFGAFGTRGTGYNTNYLRERVLRIIG
LDKQTNVAIVGAGHLGTAFARYNVRENPYTSVVGLFDVSPDIVGENIEGVPVYHLNDLQEIVRKERVQVGVITVPAVHAQ
EVVDRLVEENVKALLNFAPAKLTAPEDVRIHNVDLTIELQSLIYFAKDELNEESTQDLE
>Mature_219_residues
MNQRGEAPISVIKRLPVYLRVLDNLVKRDIEVVSSKSLSKETGFTAEQIRKDLAFFGAFGTRGTGYNTNYLRERVLRIIG
LDKQTNVAIVGAGHLGTAFARYNVRENPYTSVVGLFDVSPDIVGENIEGVPVYHLNDLQEIVRKERVQVGVITVPAVHAQ
EVVDRLVEENVKALLNFAPAKLTAPEDVRIHNVDLTIELQSLIYFAKDELNEESTQDLE

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_NATTJ (B2A618)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001918023.1
- ProteinModelPortal:   B2A618
- SMR:   B2A618
- GeneID:   6314280
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1863
- HOGENOM:   HBG482264
- OMA:   TRGVGYD
- ProtClustDB:   PRK05472
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 24473; Mature: 24473

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRGEAPISVIKRLPVYLRVLDNLVKRDIEVVSSKSLSKETGFTAEQIRKDLAFFGAFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCC
TRGTGYNTNYLRERVLRIIGLDKQTNVAIVGAGHLGTAFARYNVRENPYTSVVGLFDVSP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCHHEEEEEECCH
DIVGENIEGVPVYHLNDLQEIVRKERVQVGVITVPAVHAQEVVDRLVEENVKALLNFAPA
HHCCCCCCCCEEEEHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
KLTAPEDVRIHNVDLTIELQSLIYFAKDELNEESTQDLE
CCCCCCCCEEEEEEEEEEHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNQRGEAPISVIKRLPVYLRVLDNLVKRDIEVVSSKSLSKETGFTAEQIRKDLAFFGAFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCC
TRGTGYNTNYLRERVLRIIGLDKQTNVAIVGAGHLGTAFARYNVRENPYTSVVGLFDVSP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCHHEEEEEECCH
DIVGENIEGVPVYHLNDLQEIVRKERVQVGVITVPAVHAQEVVDRLVEENVKALLNFAPA
HHCCCCCCCCEEEEHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
KLTAPEDVRIHNVDLTIELQSLIYFAKDELNEESTQDLE
CCCCCCCCEEEEEEEEEEHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA