| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586480
Identifier: 188586480
GI number: 188586480
Start: 1951418
End: 1951945
Strand: Reverse
Name: 188586480
Synonym: Nther_1865
Alternate gene names: NA
Gene position: 1951945-1951418 (Counterclockwise)
Preceding gene: 188586481
Following gene: 188586478
Centisome position: 61.66
GC content: 35.98
Gene sequence:
>528_bases ATGGTAAATGTATGTTATCACTGTGGTTACGCCTATACTGATCAATTTTCATCTCCTAAACCTGCTCAAATAAAAGAAAT TAAAGAACAAGTCAGCGAAAATTGGGTTCCACGGGATTATGGTTCTATTCGCGACTTTCAAATGGCTGTCGAGTCTTTAA AACTTGGAATTCTTTGCGGACAGTTGAAAGGTGAAAAATACAATATCCTGGCTACATTACTTTTACATACTGCATGGATA CATAGAGAAGCCCAAGATTATAATAACGAAAAACGCTTTTTAAATTTAGCCAGGGAGTATTTTCTAAAAGTTTATCAAGA AGATACTTCAGGTCAAGTTGATCTCCCTAAACTTCTTTTTTTGCTAGGAGAACTAAGTAGAAGATTGGACAAGCGTGACG AAGCCCTTTCTTGGTTTTCAAAGTTAGTCAGTGATAAGGGGATTAAAGACGAAAAAATGATTAACAGGGCAAGGGAACAA TGGATGCTAATCAAAAAAGAAAAGGAAAGACAGAGTGGTGAAGGATAA
Upstream 100 bases:
>100_bases AAAGTTCACATCCAAAAAACCTCGCCATTCTAAATTACGTCTAAAAGAAGAGCATGGTGACTTTTTTAAAGAATACGAAC AATTAAACCCTAGTTATTAC
Downstream 100 bases:
>100_bases AAATTTTATACATGAATTCCGCGAGAATCTAGAAAATGTTTTACAACGATTTACCCTTAAAACTACCAAAGTTTTGAATA AGATGAGTTAGTGGATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MVNVCYHCGYAYTDQFSSPKPAQIKEIKEQVSENWVPRDYGSIRDFQMAVESLKLGILCGQLKGEKYNILATLLLHTAWI HREAQDYNNEKRFLNLAREYFLKVYQEDTSGQVDLPKLLFLLGELSRRLDKRDEALSWFSKLVSDKGIKDEKMINRAREQ WMLIKKEKERQSGEG
Sequences:
>Translated_175_residues MVNVCYHCGYAYTDQFSSPKPAQIKEIKEQVSENWVPRDYGSIRDFQMAVESLKLGILCGQLKGEKYNILATLLLHTAWI HREAQDYNNEKRFLNLAREYFLKVYQEDTSGQVDLPKLLFLLGELSRRLDKRDEALSWFSKLVSDKGIKDEKMINRAREQ WMLIKKEKERQSGEG >Mature_175_residues MVNVCYHCGYAYTDQFSSPKPAQIKEIKEQVSENWVPRDYGSIRDFQMAVESLKLGILCGQLKGEKYNILATLLLHTAWI HREAQDYNNEKRFLNLAREYFLKVYQEDTSGQVDLPKLLFLLGELSRRLDKRDEALSWFSKLVSDKGIKDEKMINRAREQ WMLIKKEKERQSGEG
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20540; Mature: 20540
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNVCYHCGYAYTDQFSSPKPAQIKEIKEQVSENWVPRDYGSIRDFQMAVESLKLGILCG CCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH QLKGEKYNILATLLLHTAWIHREAQDYNNEKRFLNLAREYFLKVYQEDTSGQVDLPKLLF CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LLGELSRRLDKRDEALSWFSKLVSDKGIKDEKMINRAREQWMLIKKEKERQSGEG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVNVCYHCGYAYTDQFSSPKPAQIKEIKEQVSENWVPRDYGSIRDFQMAVESLKLGILCG CCCEEEECCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH QLKGEKYNILATLLLHTAWIHREAQDYNNEKRFLNLAREYFLKVYQEDTSGQVDLPKLLF CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LLGELSRRLDKRDEALSWFSKLVSDKGIKDEKMINRAREQWMLIKKEKERQSGEG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA