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The map label for this gene is ycgA [H]

Identifier: 188586468

GI number: 188586468

Start: 1934317

End: 1935702

Strand: Reverse

Name: ycgA [H]

Synonym: Nther_1853

Alternate gene names: 188586468

Gene position: 1935702-1934317 (Counterclockwise)

Preceding gene: 188586469

Following gene: 188586462

Centisome position: 61.15

GC content: 38.46

Gene sequence:

>1386_bases
GTGAAGATAAAAGTACCACACACTTATGTGCTGCTTTTTGTAATAATCTGTATTACTGCTGCATTAACTTATGTTATTCC
GGCGGGAGAATTTCAAAGAGAAATAGATCCTGAAACAGACAGAGAAATCGTTATACCGGGAAGTTACGAAACAGTTGAGT
CAGATCCAATATCACCTTTTGGAATATTTGAATCAATACACCAGGGGATGGATGAAGTCGGGTTTATTATTTTCTTTGTA
TTGATTATTGGTGGATCTTTTAAAATGATAAGAGCAACAGGTACTATTGATGCTACAATAGGGGCAATAGTTAAAAAAGC
TGCAGGAAAAGAAAAACTTGTTATTCCCATAATTATGTTTGTATTTTCGTTGGCAGGGGCTGTATTTGGTATGGCTGAAG
AGTTGTTGCCATTCTATCCAATTATTATTGCCTTGTCCATAGCTCTAGGTTTTGATACTATTACCGGGGTTGCCATGGTA
CTACTAGGAGCTGGTGCCGGGTTTGCCGGTGCTTTTATGAATCCATTTACAGTAGGAATAGCCCAAGGTATTGCAGGCTT
GCCACTGTTTTCAGGATTTGCATTTAGATTAATAGCTTATGTAGTTATTTTAGGTATTGCGATAGTGTATGTTTATAGAT
ATGCAGACAAAATAAAGAAAAATCCAGAACTTAGCGTAACTTATGAAGAGGATAAAGAAAAACAAGGCAGCTTTGATATG
GATAATTTACCCGAACTGACTTCAAAGCACAAGCGAGTTTTTGCAGTCTTTGTAGTAGGTCTATTAATTTTAGGTTATGG
CCTAATCGAACTTGGATTTTATATTCCTGAACTAGCAGCACTGTTTTTAATAATTGGGGTAGCAAGTGCAATTGTCGGAG
GAATCAAGCCAAATGATATTGGTAAGGAATTTGTTAGTGGGGCACAAGAACTTGTGTACGGGGCTCTGATTATTGGTGTT
GCACGGGCAATAATGGTAGTTATGACGGAAGGTATGATTATTGATACAGTGATATACGGTATGGCAATGGCAATTGAAGG
ACTTCCACAAGCGTTATCAGGTGTCGGGATGTTTGTAGTTCAAACCCTTATAAACTTAATTGTACCTTCCGGGAGTGGAC
AGGCTGCTGTCTCTATGCCTATTATGGCACCTTTGGCCGATATTCTTGAAATTACTAGACAAACTGCTGTACTAGCATTT
CAATTCGGTGACGGATTTTCCAATGTAATCAGTCCAACTTCGGGATATTTTATGGCAGCTATAGCTATTGGTGGTATTTC
ATGGGATAAATGGGCAAAATGGATGCTGCCACTCTTTGCGATTTGGACAGTAGTAGGTGCAATTTTTGTAGCGATTTCAG
TTATGATTGGATACGGTCCATTTTAG

Upstream 100 bases:

>100_bases
ACGCAACTTTAGAGTACATTGATGTGGAAGAAATAGTAAAATCCGTGCATGTTTATTATGAGTTAGCTAAAAAATTCTGC
ACTTAACGAGGTGAAAAAAT

Downstream 100 bases:

>100_bases
AAAGTTTAGAATATGTGCTTCTTGAAAGATTCCACATTAACTGTTAGACCCCATATAAAAGGCCTGAGAGGGTTAATTGT
TAATTAACTTCTCAGGCTTT

Product: C4-dicarboxylate anaerobic carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MKIKVPHTYVLLFVIICITAALTYVIPAGEFQREIDPETDREIVIPGSYETVESDPISPFGIFESIHQGMDEVGFIIFFV
LIIGGSFKMIRATGTIDATIGAIVKKAAGKEKLVIPIIMFVFSLAGAVFGMAEELLPFYPIIIALSIALGFDTITGVAMV
LLGAGAGFAGAFMNPFTVGIAQGIAGLPLFSGFAFRLIAYVVILGIAIVYVYRYADKIKKNPELSVTYEEDKEKQGSFDM
DNLPELTSKHKRVFAVFVVGLLILGYGLIELGFYIPELAALFLIIGVASAIVGGIKPNDIGKEFVSGAQELVYGALIIGV
ARAIMVVMTEGMIIDTVIYGMAMAIEGLPQALSGVGMFVVQTLINLIVPSGSGQAAVSMPIMAPLADILEITRQTAVLAF
QFGDGFSNVISPTSGYFMAAIAIGGISWDKWAKWMLPLFAIWTVVGAIFVAISVMIGYGPF

Sequences:

>Translated_461_residues
MKIKVPHTYVLLFVIICITAALTYVIPAGEFQREIDPETDREIVIPGSYETVESDPISPFGIFESIHQGMDEVGFIIFFV
LIIGGSFKMIRATGTIDATIGAIVKKAAGKEKLVIPIIMFVFSLAGAVFGMAEELLPFYPIIIALSIALGFDTITGVAMV
LLGAGAGFAGAFMNPFTVGIAQGIAGLPLFSGFAFRLIAYVVILGIAIVYVYRYADKIKKNPELSVTYEEDKEKQGSFDM
DNLPELTSKHKRVFAVFVVGLLILGYGLIELGFYIPELAALFLIIGVASAIVGGIKPNDIGKEFVSGAQELVYGALIIGV
ARAIMVVMTEGMIIDTVIYGMAMAIEGLPQALSGVGMFVVQTLINLIVPSGSGQAAVSMPIMAPLADILEITRQTAVLAF
QFGDGFSNVISPTSGYFMAAIAIGGISWDKWAKWMLPLFAIWTVVGAIFVAISVMIGYGPF
>Mature_461_residues
MKIKVPHTYVLLFVIICITAALTYVIPAGEFQREIDPETDREIVIPGSYETVESDPISPFGIFESIHQGMDEVGFIIFFV
LIIGGSFKMIRATGTIDATIGAIVKKAAGKEKLVIPIIMFVFSLAGAVFGMAEELLPFYPIIIALSIALGFDTITGVAMV
LLGAGAGFAGAFMNPFTVGIAQGIAGLPLFSGFAFRLIAYVVILGIAIVYVYRYADKIKKNPELSVTYEEDKEKQGSFDM
DNLPELTSKHKRVFAVFVVGLLILGYGLIELGFYIPELAALFLIIGVASAIVGGIKPNDIGKEFVSGAQELVYGALIIGV
ARAIMVVMTEGMIIDTVIYGMAMAIEGLPQALSGVGMFVVQTLINLIVPSGSGQAAVSMPIMAPLADILEITRQTAVLAF
QFGDGFSNVISPTSGYFMAAIAIGGISWDKWAKWMLPLFAIWTVVGAIFVAISVMIGYGPF

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=497, Percent_Identity=34.0040241448692, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 49282; Mature: 49282

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVPHTYVLLFVIICITAALTYVIPAGEFQREIDPETDREIVIPGSYETVESDPISPF
CEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCHH
GIFESIHQGMDEVGFIIFFVLIIGGSFKMIRATGTIDATIGAIVKKAAGKEKLVIPIIMF
HHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH
VFSLAGAVFGMAEELLPFYPIIIALSIALGFDTITGVAMVLLGAGAGFAGAFMNPFTVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
AQGIAGLPLFSGFAFRLIAYVVILGIAIVYVYRYADKIKKNPELSVTYEEDKEKQGSFDM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
DNLPELTSKHKRVFAVFVVGLLILGYGLIELGFYIPELAALFLIIGVASAIVGGIKPNDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GKEFVSGAQELVYGALIIGVARAIMVVMTEGMIIDTVIYGMAMAIEGLPQALSGVGMFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLINLIVPSGSGQAAVSMPIMAPLADILEITRQTAVLAFQFGDGFSNVISPTSGYFMAA
HHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCCCCHHHHH
IAIGGISWDKWAKWMLPLFAIWTVVGAIFVAISVMIGYGPF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIKVPHTYVLLFVIICITAALTYVIPAGEFQREIDPETDREIVIPGSYETVESDPISPF
CEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCHH
GIFESIHQGMDEVGFIIFFVLIIGGSFKMIRATGTIDATIGAIVKKAAGKEKLVIPIIMF
HHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH
VFSLAGAVFGMAEELLPFYPIIIALSIALGFDTITGVAMVLLGAGAGFAGAFMNPFTVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
AQGIAGLPLFSGFAFRLIAYVVILGIAIVYVYRYADKIKKNPELSVTYEEDKEKQGSFDM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
DNLPELTSKHKRVFAVFVVGLLILGYGLIELGFYIPELAALFLIIGVASAIVGGIKPNDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GKEFVSGAQELVYGALIIGVARAIMVVMTEGMIIDTVIYGMAMAIEGLPQALSGVGMFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLINLIVPSGSGQAAVSMPIMAPLADILEITRQTAVLAFQFGDGFSNVISPTSGYFMAA
HHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCCCCHHHHH
IAIGGISWDKWAKWMLPLFAIWTVVGAIFVAISVMIGYGPF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]