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The map label for this gene is opuAC [H]

Identifier: 188586237

GI number: 188586237

Start: 1698903

End: 1699784

Strand: Reverse

Name: opuAC [H]

Synonym: Nther_1620

Alternate gene names: 188586237

Gene position: 1699784-1698903 (Counterclockwise)

Preceding gene: 188586238

Following gene: 188586236

Centisome position: 53.7

GC content: 41.16

Gene sequence:

>882_bases
ATGAGTAAGAAGCTGATTTTAGTTTTAGCAACAGTATTTTTAGTAGGAACTATTGGTTTAGCTGGTTGTGATGAGCCAGC
TCAAGATGGGGACCCAGAAGGAACCCAAGAGGAGATTGAATTAGCGTATGTTAACTGGGCATGTGCTGAAGCCCAAACAC
ATGTAGCCCAAGAAGTAATTGAAAGCGAATTGGGATACGATGTGGAGATTACAATGGCAGATGCTGGTCCTATTTGGGCT
GACGTAGCTGCAGGAAACCAAGACGGAATGGTTTGTGCTTGGTTACCAGTAACGCAAGGTGAGTACGATGATGAATATGA
TGGCGATGTAGACAACTTAGGACCAGTTTATGAAGGAGCTAGAATTGGCTTAGTTGTTCCTGAATACGTAGATATCGATA
GTATTGAAGAGATGGATGAAATCGCTGATGAATTAGATAATGAAATAGTTGGAATCGAACCCGGTGCAGGAATTATGATT
AATACTGATGAAGCACTTGAAGAGTACGACAGTCTAGCCGAGTTTGAATTGATTGATAGTTCCGATGCAGGAATGACTAC
ATCTTTAAGTGATGCTGTAGACAATGAAGAGCCAATTGTTGTTACAGGATGGACACCACATTGGAAATTTGCCGAGTGGG
ATCTTGAATTCTTAGAAGATCCATTGAATGTATACGGAGAAGAAGAACATATAGCTGCAGTTGCAAGACAAGGGCTAGAA
GATGATGCCCCAGATGTTTACGAATTCCTTGATAACTACATCATGGATGACGATCAGATTGGTGAGGTAATGGGTATGAT
TGAAGAAACTGATGACCCTGAAGCATCTGCCGAAGAATGGGTTGAAGAGAATCAAGATGTTGTTCAAGAATGGTTAGATT
AA

Upstream 100 bases:

>100_bases
AATGTTTCAAAATGAGTGAAAACACCTTTTTAAAAGGTGAACATATAGTTTTCAATCAATCTATGAAGTTCAGTATCAAA
AAAAGGGAGGGGTTAGAATC

Downstream 100 bases:

>100_bases
TCTAATCAAATTAATAAAAAAAGCTGGCCATTAGGCCAGCTTTTTTTATTATAATATTTTATAAATTAATGTGGTTTGAG
GTGTTTGAATTTTGATAACT

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSKKLILVLATVFLVGTIGLAGCDEPAQDGDPEGTQEEIELAYVNWACAEAQTHVAQEVIESELGYDVEITMADAGPIWA
DVAAGNQDGMVCAWLPVTQGEYDDEYDGDVDNLGPVYEGARIGLVVPEYVDIDSIEEMDEIADELDNEIVGIEPGAGIMI
NTDEALEEYDSLAEFELIDSSDAGMTTSLSDAVDNEEPIVVTGWTPHWKFAEWDLEFLEDPLNVYGEEEHIAAVARQGLE
DDAPDVYEFLDNYIMDDDQIGEVMGMIEETDDPEASAEEWVEENQDVVQEWLD

Sequences:

>Translated_293_residues
MSKKLILVLATVFLVGTIGLAGCDEPAQDGDPEGTQEEIELAYVNWACAEAQTHVAQEVIESELGYDVEITMADAGPIWA
DVAAGNQDGMVCAWLPVTQGEYDDEYDGDVDNLGPVYEGARIGLVVPEYVDIDSIEEMDEIADELDNEIVGIEPGAGIMI
NTDEALEEYDSLAEFELIDSSDAGMTTSLSDAVDNEEPIVVTGWTPHWKFAEWDLEFLEDPLNVYGEEEHIAAVARQGLE
DDAPDVYEFLDNYIMDDDQIGEVMGMIEETDDPEASAEEWVEENQDVVQEWLD
>Mature_292_residues
SKKLILVLATVFLVGTIGLAGCDEPAQDGDPEGTQEEIELAYVNWACAEAQTHVAQEVIESELGYDVEITMADAGPIWAD
VAAGNQDGMVCAWLPVTQGEYDDEYDGDVDNLGPVYEGARIGLVVPEYVDIDSIEEMDEIADELDNEIVGIEPGAGIMIN
TDEALEEYDSLAEFELIDSSDAGMTTSLSDAVDNEEPIVVTGWTPHWKFAEWDLEFLEDPLNVYGEEEHIAAVARQGLED
DAPDVYEFLDNYIMDDDQIGEVMGMIEETDDPEASAEEWVEENQDVVQEWLD

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32288; Mature: 32157

Theoretical pI: Translated: 3.09; Mature: 3.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLILVLATVFLVGTIGLAGCDEPAQDGDPEGTQEEIELAYVNWACAEAQTHVAQEVI
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEHHHHHHHHHHHHHHH
ESELGYDVEITMADAGPIWADVAAGNQDGMVCAWLPVTQGEYDDEYDGDVDNLGPVYEGA
HHHCCCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHCCC
RIGLVVPEYVDIDSIEEMDEIADELDNEIVGIEPGAGIMINTDEALEEYDSLAEFELIDS
EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEECHHHHHHHHHHHHEEEECC
SDAGMTTSLSDAVDNEEPIVVTGWTPHWKFAEWDLEFLEDPLNVYGEEEHIAAVARQGLE
CCCCCCCCHHHHCCCCCCEEEECCCCCCCCHHCCHHHHHCHHHHCCCHHHHHHHHHCCCC
DDAPDVYEFLDNYIMDDDQIGEVMGMIEETDDPEASAEEWVEENQDVVQEWLD
CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
SKKLILVLATVFLVGTIGLAGCDEPAQDGDPEGTQEEIELAYVNWACAEAQTHVAQEVI
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEEEEEEHHHHHHHHHHHHHHH
ESELGYDVEITMADAGPIWADVAAGNQDGMVCAWLPVTQGEYDDEYDGDVDNLGPVYEGA
HHHCCCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHCCC
RIGLVVPEYVDIDSIEEMDEIADELDNEIVGIEPGAGIMINTDEALEEYDSLAEFELIDS
EEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEECHHHHHHHHHHHHEEEECC
SDAGMTTSLSDAVDNEEPIVVTGWTPHWKFAEWDLEFLEDPLNVYGEEEHIAAVARQGLE
CCCCCCCCHHHHCCCCCCEEEECCCCCCCCHHCCHHHHHCHHHHCCCHHHHHHHHHCCCC
DDAPDVYEFLDNYIMDDDQIGEVMGMIEETDDPEASAEEWVEENQDVVQEWLD
CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]