| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is gpr [H]
Identifier: 188585803
GI number: 188585803
Start: 1247241
End: 1248317
Strand: Direct
Name: gpr [H]
Synonym: Nther_1177
Alternate gene names: 188585803
Gene position: 1247241-1248317 (Clockwise)
Preceding gene: 188585801
Following gene: 188585804
Centisome position: 39.4
GC content: 39.93
Gene sequence:
>1077_bases ATGAGCCATGATAAGAAAGATATGAATTCTAATAAGGAAGGTTTAAATTCAAGTATCCGAACAGACTTGGCAATTGAAGC TATGGAAATGGTATCTCCTGAAACTGAGAAAGATATTCCAGGAGTAGAAAGTGAAACTTTTCAAGAGGATGGAATAACAG TTAACCATCTCAGTATCACGTCACCACAAGGTCAGCAAGCTATGAATAAAGCCATGGGGAATTATGTTAATATTGAAGCT CCGGGCCTGCGGGAAAAAAATACAGATCTACAAGAAGAGGTTAGCCAGATTGTAGCGAGAGAATTACAAAATATTGCCCA ATTTAATGATAGTACTGAATTGATGGTAGTAGGATTGGGGAATTGGAATGTAACTCCCGATTCTATTGGCCCTAAAGTAG TTGAAGATCTAGTTATCACAAGACATTTAAAACAATTAGTACCAGAACAATTAGGTGAAGGTTTTCGATCTATATCAGGG GTTGCACCTGGAGTCATGGGTTTAACTGGAGTAGAAACAGGTGAAATAATCAAAGGAATTGTAGAAGAAGCTAAACCTAA TATGATATTGGCCATTGATGCTTTAGCAGCTCGAAACCTTAGTAGATTAAACACAACAGTTCAAATTGCTGATAACGGCA TTCACCCTGGGTCCGGGGTAGGTAACGATCGAATGGGAATAAATAAAGAGACTATGGGGGTTCCAGTTGTTGCTATGGGA GTACCCACTGTAGTTGATGCAACTACCTTGGTAGGTGATACTTTACAAATGGTTAACAATCAAGGTCAGCAAGGTCAAAA TGCTCAACAAGGACAGCAACCAACCCAAACTCAATCACAAGGTATGCCAGGACCAGGCAATCCAGCTCAAGGATCTCCTG GCGGCAATCAACAAGTTGATCGTAATTTAGTCAATCAAGCACTTCAACCTTATAGTGGTGAAGGACGAACCTTGATGATT ACTCCTAAGGAAGTAGATCAGTTTGTAGATGATATTTCTGAAGTTTTGGCTGGTGGAATAAATGTGGCAGTTCATCCTCG GGTTGCCCAGGAAAATCCCGGAAAGTATTTACAATAA
Upstream 100 bases:
>100_bases AACTTATATAAATCAAGAGTTTAAATCCACTCCTAGGGCGAATTAATATTTCAAAATTGGTGCAGGATAATACTGAAGAA AACAAATAGGAGGTTACTAA
Downstream 100 bases:
>100_bases GTCGCCAATTCGGCGGCTTATTTTTTTAATCAAGTAATAGATCTTCTGCATATAATTAATATTAGCAATTAAACAATGTA ATTGAGGGGGACGAGGCAGT
Product: germination protease
Products: NA
Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSHDKKDMNSNKEGLNSSIRTDLAIEAMEMVSPETEKDIPGVESETFQEDGITVNHLSITSPQGQQAMNKAMGNYVNIEA PGLREKNTDLQEEVSQIVARELQNIAQFNDSTELMVVGLGNWNVTPDSIGPKVVEDLVITRHLKQLVPEQLGEGFRSISG VAPGVMGLTGVETGEIIKGIVEEAKPNMILAIDALAARNLSRLNTTVQIADNGIHPGSGVGNDRMGINKETMGVPVVAMG VPTVVDATTLVGDTLQMVNNQGQQGQNAQQGQQPTQTQSQGMPGPGNPAQGSPGGNQQVDRNLVNQALQPYSGEGRTLMI TPKEVDQFVDDISEVLAGGINVAVHPRVAQENPGKYLQ
Sequences:
>Translated_358_residues MSHDKKDMNSNKEGLNSSIRTDLAIEAMEMVSPETEKDIPGVESETFQEDGITVNHLSITSPQGQQAMNKAMGNYVNIEA PGLREKNTDLQEEVSQIVARELQNIAQFNDSTELMVVGLGNWNVTPDSIGPKVVEDLVITRHLKQLVPEQLGEGFRSISG VAPGVMGLTGVETGEIIKGIVEEAKPNMILAIDALAARNLSRLNTTVQIADNGIHPGSGVGNDRMGINKETMGVPVVAMG VPTVVDATTLVGDTLQMVNNQGQQGQNAQQGQQPTQTQSQGMPGPGNPAQGSPGGNQQVDRNLVNQALQPYSGEGRTLMI TPKEVDQFVDDISEVLAGGINVAVHPRVAQENPGKYLQ >Mature_357_residues SHDKKDMNSNKEGLNSSIRTDLAIEAMEMVSPETEKDIPGVESETFQEDGITVNHLSITSPQGQQAMNKAMGNYVNIEAP GLREKNTDLQEEVSQIVARELQNIAQFNDSTELMVVGLGNWNVTPDSIGPKVVEDLVITRHLKQLVPEQLGEGFRSISGV APGVMGLTGVETGEIIKGIVEEAKPNMILAIDALAARNLSRLNTTVQIADNGIHPGSGVGNDRMGINKETMGVPVVAMGV PTVVDATTLVGDTLQMVNNQGQQGQNAQQGQQPTQTQSQGMPGPGNPAQGSPGGNQQVDRNLVNQALQPYSGEGRTLMIT PKEVDQFVDDISEVLAGGINVAVHPRVAQENPGKYLQ
Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005080 - InterPro: IPR000671 - ProDom: PD041835 [H]
Pfam domain/function: PF03418 Peptidase_A25 [H]
EC number: =3.4.24.78 [H]
Molecular weight: Translated: 38184; Mature: 38053
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDKKDMNSNKEGLNSSIRTDLAIEAMEMVSPETEKDIPGVESETFQEDGITVNHLSIT CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEEEEC SPQGQQAMNKAMGNYVNIEAPGLREKNTDLQEEVSQIVARELQNIAQFNDSTELMVVGLG CCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC NWNVTPDSIGPKVVEDLVITRHLKQLVPEQLGEGFRSISGVAPGVMGLTGVETGEIIKGI CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHH VEEAKPNMILAIDALAARNLSRLNTTVQIADNGIHPGSGVGNDRMGINKETMGVPVVAMG HHHCCCCEEEEEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCEEECC VPTVVDATTLVGDTLQMVNNQGQQGQNAQQGQQPTQTQSQGMPGPGNPAQGSPGGNQQVD CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHH RNLVNQALQPYSGEGRTLMITPKEVDQFVDDISEVLAGGINVAVHPRVAQENPGKYLQ HHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure SHDKKDMNSNKEGLNSSIRTDLAIEAMEMVSPETEKDIPGVESETFQEDGITVNHLSIT CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEEEEEC SPQGQQAMNKAMGNYVNIEAPGLREKNTDLQEEVSQIVARELQNIAQFNDSTELMVVGLG CCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC NWNVTPDSIGPKVVEDLVITRHLKQLVPEQLGEGFRSISGVAPGVMGLTGVETGEIIKGI CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHH VEEAKPNMILAIDALAARNLSRLNTTVQIADNGIHPGSGVGNDRMGINKETMGVPVVAMG HHHCCCCEEEEEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCEEECC VPTVVDATTLVGDTLQMVNNQGQQGQNAQQGQQPTQTQSQGMPGPGNPAQGSPGGNQQVD CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHH RNLVNQALQPYSGEGRTLMITPKEVDQFVDDISEVLAGGINVAVHPRVAQENPGKYLQ HHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]