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The map label for this gene is yqeN [H]

Identifier: 188585801

GI number: 188585801

Start: 1245752

End: 1246756

Strand: Direct

Name: yqeN [H]

Synonym: Nther_1175

Alternate gene names: 188585801

Gene position: 1245752-1246756 (Clockwise)

Preceding gene: 188585800

Following gene: 188585803

Centisome position: 39.35

GC content: 33.73

Gene sequence:

>1005_bases
ATGTCAGGAAATAAAATACCCCAGTTAACTGAAGAGCAATTAAAATCTGTTTATTTAATTACAGGAGAATCATATTTTCA
AAAACAATTTGGACAAAAAATAAAAGATTTATTGTTAAAAACCGATTTTGACCTTAGCAGTTATGAAAAATTAGATGGTA
AAGAATATAATTTGGCTGATGTAGTTCAAAAAGCTGAATCTTTACCATTTTTTAGTGATAGGCGTTTAGTCATGGTGAGT
AATGCTCCTTATTTTAGTGAACAATTATCAGAAAAAGAGAAACAAATATTTTCAGATTATCTAGACAATCCTGCTCCAAC
TACTGTACTAGTATTTTTTGCTGATAAGGTAGATAAACGTCAAAAATTAGTAAAGAACCTCAAAAAAAGAGGTATGCTCT
ATGAATTTAGCCAATTAAAACCTTGGGAAATAGATAAGTGGATTAGGGAATGGGTTAATATGAGAGGAAAAGATATTCAA
AGAAACGCCGTTTCTCTTTTAGTTCAGCGTATTGGCAATGAACTGCCTTTATTGGAACAGGAATTAGAAAAGCTAGATCT
CTATACTGCTGGTATCAAAAAAATAGAAGAAAATCATGTGAGACAGGTAGTACCGGAATCTTTAGAGACGAATGTGTTTA
AATTGGTCGATAAAATTGGGGAAAAACAATCAGGGATTGCCCTTGCATTGGTTCGAAAATTGACATTAAACGAGCCACCA
GTTAAGATACTGTTTTTAATAGCTCGCCAGTTCAGATTACTAATAAAAATAAAAGCTTATCTTGACGACGGTCTGGCTGT
TTCAGAAGCGAGCAAGAAACTAGGCATTCCTCCTTTTATTGGAAAAAAAGTGGCCGCACAGAGTAAAAATTTCAGTTATC
AAGAGCTGCAGGATGCTGTTAAAGAGGTACAGCGGATTGATTATGCCATTAAAACAGGTCAACTGGAAGGTACTTTTGCC
CTGGAGCGTTTAATAATGTCATTTGTTGACAAAATTGAAGCATAA

Upstream 100 bases:

>100_bases
TTAGGTTATATGGCAATACCCCATGGGGATATGATGTTATCAGGAGCTTTTGGGCTTGTAAGGGGAGTTAAAAATTACGT
TTATAGAAAGGATAATTTAA

Downstream 100 bases:

>100_bases
AAAAATCTACTCATAAAGAGTAGATTTTTTTTAACTAGCTATGTTATTAAACTTAGCTGTAAGCCTGGATTTTTTCCTAG
CCGCATTATTTTTATGGATA

Product: DNA polymerase III, delta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MSGNKIPQLTEEQLKSVYLITGESYFQKQFGQKIKDLLLKTDFDLSSYEKLDGKEYNLADVVQKAESLPFFSDRRLVMVS
NAPYFSEQLSEKEKQIFSDYLDNPAPTTVLVFFADKVDKRQKLVKNLKKRGMLYEFSQLKPWEIDKWIREWVNMRGKDIQ
RNAVSLLVQRIGNELPLLEQELEKLDLYTAGIKKIEENHVRQVVPESLETNVFKLVDKIGEKQSGIALALVRKLTLNEPP
VKILFLIARQFRLLIKIKAYLDDGLAVSEASKKLGIPPFIGKKVAAQSKNFSYQELQDAVKEVQRIDYAIKTGQLEGTFA
LERLIMSFVDKIEA

Sequences:

>Translated_334_residues
MSGNKIPQLTEEQLKSVYLITGESYFQKQFGQKIKDLLLKTDFDLSSYEKLDGKEYNLADVVQKAESLPFFSDRRLVMVS
NAPYFSEQLSEKEKQIFSDYLDNPAPTTVLVFFADKVDKRQKLVKNLKKRGMLYEFSQLKPWEIDKWIREWVNMRGKDIQ
RNAVSLLVQRIGNELPLLEQELEKLDLYTAGIKKIEENHVRQVVPESLETNVFKLVDKIGEKQSGIALALVRKLTLNEPP
VKILFLIARQFRLLIKIKAYLDDGLAVSEASKKLGIPPFIGKKVAAQSKNFSYQELQDAVKEVQRIDYAIKTGQLEGTFA
LERLIMSFVDKIEA
>Mature_333_residues
SGNKIPQLTEEQLKSVYLITGESYFQKQFGQKIKDLLLKTDFDLSSYEKLDGKEYNLADVVQKAESLPFFSDRRLVMVSN
APYFSEQLSEKEKQIFSDYLDNPAPTTVLVFFADKVDKRQKLVKNLKKRGMLYEFSQLKPWEIDKWIREWVNMRGKDIQR
NAVSLLVQRIGNELPLLEQELEKLDLYTAGIKKIEENHVRQVVPESLETNVFKLVDKIGEKQSGIALALVRKLTLNEPPV
KILFLIARQFRLLIKIKAYLDDGLAVSEASKKLGIPPFIGKKVAAQSKNFSYQELQDAVKEVQRIDYAIKTGQLEGTFAL
ERLIMSFVDKIEA

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: NA

Molecular weight: Translated: 38445; Mature: 38314

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNKIPQLTEEQLKSVYLITGESYFQKQFGQKIKDLLLKTDFDLSSYEKLDGKEYNLAD
CCCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHH
VVQKAESLPFFSDRRLVMVSNAPYFSEQLSEKEKQIFSDYLDNPAPTTVLVFFADKVDKR
HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
QKLVKNLKKRGMLYEFSQLKPWEIDKWIREWVNMRGKDIQRNAVSLLVQRIGNELPLLEQ
HHHHHHHHHCCCEEEHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHH
ELEKLDLYTAGIKKIEENHVRQVVPESLETNVFKLVDKIGEKQSGIALALVRKLTLNEPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
VKILFLIARQFRLLIKIKAYLDDGLAVSEASKKLGIPPFIGKKVAAQSKNFSYQELQDAV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHH
KEVQRIDYAIKTGQLEGTFALERLIMSFVDKIEA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGNKIPQLTEEQLKSVYLITGESYFQKQFGQKIKDLLLKTDFDLSSYEKLDGKEYNLAD
CCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHH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HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]