| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585796
Identifier: 188585796
GI number: 188585796
Start: 1238076
End: 1240313
Strand: Direct
Name: 188585796
Synonym: Nther_1170
Alternate gene names: NA
Gene position: 1238076-1240313 (Clockwise)
Preceding gene: 188585795
Following gene: 188585797
Centisome position: 39.11
GC content: 41.6
Gene sequence:
>2238_bases ATGGCAGATAATAACAATCAAAACCAAAAGAAGCAAGAAAACTTATCTACTGATGAAAAACTCTTAATTGAAGATATTTT ACATGATCTTGATAAGTATCGCCCTAAAAGAAAAGGTTGGGCCTGGAGAGAAGAGCAAGGCCCTAGGCAAGTGGGACCCT TTAATTATAAAGAAGTATCCAAATCACTTAAAAATAGTGTACCTCTACCAGCAGCTAGAAGTTTTCAAGAGATTGATCCT CAACCGGATTGTGTCATAACATCTGAAATTGCTTCTGGTAGATTTGAAGATGATATTCGTCGGATGAGAATGGCTGCCTG GCATGGTGCAGATCATATGATGGTGATTAGGACAGCCGGTCAGAGTCACTTCGATGGTTTGATTGAGGGAACACCTGAAG GAGTGGGTGGTATCCCTATCTCAAGAAAACAATTGAGAGCTACTCGCAAAGGGCTGGATTTGATTGAAGAGGAAGTGGGG CGTCCCCTCAATCTTCACTCATATGTTAGTGGAGTATCTGGACCAGAAATAGCTCTGCTATTTGCAGAAGAAGGTGTAAA CGGTGCTCATCAGGACCCCCAATACAATGTTCTTTACAGAAATGTTAATATGGTTCGTTCCTTTGTCGATGCGGCAGTTG CTAAAAACTTGATGAAATCAGTGGATATGCTACAGATAGACGGTGCTCACAATGCCAACGCTACAGCCCGAGAAGCATGG AAAGTTATGCCTGAACTAATGGTACAACATGCTATTAACACAGCATATTCCAGGCGAATCGGAATGCCTGATGAATTGAT TTCACTAAGTAGTGTGCCGCCTACTGCACCGCCAGCACCTGCGTTAACTTACGATTTACCCTATGCGGTAGCTTTGAGAG AGTTGTTCCCTAAGAATAATATTAGGGCTCAAATGAACACTAAATATATTGAATCAGACACTAGAGAAGCAACAGTCACT CATGTTCTGAACCTGCTTATCAGTCGATTGACTAGGGCAGAAATTCAGAGTACTATTACGCCAGATGAAGGTAGGAATGT GCCATGGCATCATTTCAGTGTGCAAGCTGTTGACACTGCAAAACAAGCCCTGTTGGGAATGGATGGCTTAAAAGACTTGG TAGAAATTAAGCGCGATGGCATTGTAGGAGAAAGAGTACGTGAACTAAAAGAACGAGCTGTACTCTTCTTTGAAGAAATT CTGGAAACGGGTGGTTATTTCAAAGCTGTTGAAGAAGGCTATTTTGTTGACTCCGGTTTTTATCCTGAACGCAATGGTGA CGGTATTCAAAGAGATATCGACGGCGGAGTGGGTGCCAATACCATAGTAAAGAGAGACGAAGACTACATGGCACCTGTCT GTGAGCACTTTGGATACAATAACCTTCCTCAAGAATGGGATTCACCATGTGAGCCAGTTGATGGATGTACCCTATGTGAC CATGATAAAATTGCTTATATTGATGAATTAGATGATGAAGACAACGTAGAAAAGAGATTAGAGAAAACTGAAGATTACCG TAAAGCTGAGAAAAAACTGATACCAGAAGTTGAATGGGCAGCAGATAGAATTGCATGCCTAACAATGTTCCTACCTGTTT CTGAGAGAGTTGCAGAATACGCAGCACTAGAAATGGTAGGTAAAATGGGTTGGGAAGATGCAGAAGTGATCCACAAATAC AGTATGCAGCCGGCTGAAGGAACTTATGTTGAAGTCAAAGGTCGTGTACCTCATGAAATCAATCCATCTGAACTAGATAT ACCTGAACCGGAAGAACTGCTTCCTGAAGACGAGATTCGGGATTATGTATCAGAAAACGGCATGAAAGTAGTAGCTGCTA CAGTAGGAGAAGATGAGCACTCCGTTGGTATGAGAGAAATCATTGATATCAAACACGGTGGAATCGAAGCTTTCGGTATC AAGACAGACTATCTGGGTACCTCAGTACCTGTAGAAAAAGTAGTTGATGCTGCAGTAGAGATTGATGCTGATGCCATCTT GATCAGTACAATTATTACACATGGTGATGTTCATAGAGAAAATATGAAAAAGTTACATCAGCTTTGTGTGGAAAAAGGAA TGCGAGATAAGGTGATCTTGATAGGTGGAGGAACCCAGGTGAATGATGACATTGCAAAAGAATCCGGACTTGATGCTGGA TTTGGAAGAGGTACAAAAGGAATTAATGTGGCAAGCTATCTTGTAAAACAAATGAAAGAAGATGCTGACTCCAATTAG
Upstream 100 bases:
>100_bases TAGCCCGTGATCAAGGAATTGAAATTAAAGAAGCGGGAAGAGCCCTGGCTGATGGTAAACACTGGGATAGAGCAGTAGAG CTGTTTGGAGGTGGTAAGTA
Downstream 100 bases:
>100_bases TGGCTCTAATTAAGGAGGTATTGCGATGGGACAGGAAAAACTAGTAGCAGAAGTCGGCAGTACTACTACAGTTGTTTCAA TGTATAATGAGAAGGGAAAG
Product: D-Lysine 56-aminomutase alpha subunit
Products: NA
Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Lysine 5 6-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit
Number of amino acids: Translated: 745; Mature: 744
Protein sequence:
>745_residues MADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVSKSLKNSVPLPAARSFQEIDP QPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAGQSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVG RPLNLHSYVSGVSGPEIALLFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNNIRAQMNTKYIESDTREATVT HVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTAKQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEI LETGGYFKAVEEGYFVDSGFYPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEYAALEMVGKMGWEDAEVIHKY SMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIRDYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGI KTDYLGTSVPVEKVVDAAVEIDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG FGRGTKGINVASYLVKQMKEDADSN
Sequences:
>Translated_745_residues MADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVSKSLKNSVPLPAARSFQEIDP QPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAGQSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVG RPLNLHSYVSGVSGPEIALLFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNNIRAQMNTKYIESDTREATVT HVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTAKQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEI LETGGYFKAVEEGYFVDSGFYPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEYAALEMVGKMGWEDAEVIHKY SMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIRDYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGI KTDYLGTSVPVEKVVDAAVEIDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG FGRGTKGINVASYLVKQMKEDADSN >Mature_744_residues ADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVSKSLKNSVPLPAARSFQEIDPQ PDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAGQSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVGR PLNLHSYVSGVSGPEIALLFAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAWK VMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNNIRAQMNTKYIESDTREATVTH VLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTAKQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEIL ETGGYFKAVEEGYFVDSGFYPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCDH DKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEYAALEMVGKMGWEDAEVIHKYS MQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIRDYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGIK TDYLGTSVPVEKVVDAAVEIDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAGF GRGTKGINVASYLVKQMKEDADSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83188; Mature: 83057
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVS CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHH KSLKNSVPLPAARSFQEIDPQPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAG HHHHHCCCCCCHHHHHHCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC QSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVGRPLNLHSYVSGVSGPEIALL CHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEE FAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW EECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHH KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNN HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCC IRAQMNTKYIESDTREATVTHVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTA CCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHH KQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEILETGGYFKAVEEGYFVDSGF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCEEECCCC YPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD CCCCCCCCCCHHCCCCCCCCHHEECCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEECC HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEY CCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AALEMVGKMGWEDAEVIHKYSMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIR HHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHH DYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGIKTDYLGTSVPVEKVVDAAVE HHHHCCCCEEEEEECCCCHHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH IDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCC FGRGTKGINVASYLVKQMKEDADSN CCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADNNNQNQKKQENLSTDEKLLIEDILHDLDKYRPKRKGWAWREEQGPRQVGPFNYKEVS CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHH KSLKNSVPLPAARSFQEIDPQPDCVITSEIASGRFEDDIRRMRMAAWHGADHMMVIRTAG HHHHHCCCCCCHHHHHHCCCCCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECC QSHFDGLIEGTPEGVGGIPISRKQLRATRKGLDLIEEEVGRPLNLHSYVSGVSGPEIALL CHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEE FAEEGVNGAHQDPQYNVLYRNVNMVRSFVDAAVAKNLMKSVDMLQIDGAHNANATAREAW EECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHH KVMPELMVQHAINTAYSRRIGMPDELISLSSVPPTAPPAPALTYDLPYAVALRELFPKNN HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCC IRAQMNTKYIESDTREATVTHVLNLLISRLTRAEIQSTITPDEGRNVPWHHFSVQAVDTA CCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHH KQALLGMDGLKDLVEIKRDGIVGERVRELKERAVLFFEEILETGGYFKAVEEGYFVDSGF HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCEEECCCC YPERNGDGIQRDIDGGVGANTIVKRDEDYMAPVCEHFGYNNLPQEWDSPCEPVDGCTLCD CCCCCCCCCCHHCCCCCCCCHHEECCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEECC HDKIAYIDELDDEDNVEKRLEKTEDYRKAEKKLIPEVEWAADRIACLTMFLPVSERVAEY CCCEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AALEMVGKMGWEDAEVIHKYSMQPAEGTYVEVKGRVPHEINPSELDIPEPEELLPEDEIR HHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHH DYVSENGMKVVAATVGEDEHSVGMREIIDIKHGGIEAFGIKTDYLGTSVPVEKVVDAAVE HHHHCCCCEEEEEECCCCHHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHH IDADAILISTIITHGDVHRENMKKLHQLCVEKGMRDKVILIGGGTQVNDDIAKESGLDAG CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCCC FGRGTKGINVASYLVKQMKEDADSN CCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA