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The map label for this gene is ccsB [H]

Identifier: 188585745

GI number: 188585745

Start: 1186036

End: 1187409

Strand: Direct

Name: ccsB [H]

Synonym: Nther_1119

Alternate gene names: 188585745

Gene position: 1186036-1187409 (Clockwise)

Preceding gene: 188585742

Following gene: 188585746

Centisome position: 37.47

GC content: 32.68

Gene sequence:

>1374_bases
ATGGCAGACCAGGAGAAATCCAAACAGAATGAAAAAGATGAGTCTCAAGAACAGTTTATTAAAAAAATATTTAATTTTTT
AAGTTCTATGAAAGCAGGGATCCTTTTATTAATCTTGGTAGCAGTAATATCTAGTATAGGAACCTTTATTCCACAAGAAC
ACCCCCCTGAACAATATCATGAACAATATAGTGAGTTAGTATCAAGTATTATTTTAGCTTTGGGATTAGATAATATTTTT
GAAGTCTGGTGGTTTGTCGGCCTAATTGCTCTTTTATGTGCTAACTTATTTCTCTGTAGTTTAAAAAGACTTCCCGGAAT
TTATCGTAGAGCTTTTTATCCTAAAAAAATATTGGATGAAAACCAATTGCAAAATTATAACAATTCAGCCACTATAAAAG
TTGAGGATTCCCAAGAAGAAGTAGTTTCTAAAGTATCGGAATGTTTTAGGGTAAAGAAATACAATACTGAAGTATTAGAA
GACGAAAGTTCGGGAGAAAAAGTGTTATTTGCGGAACGAGGGAAATTAGGATATTTTGGTTCATTTCTTACTCATTTAAG
TATTGTCATATTAGTTCTTGGTTTTGCTTATGGAAATAGGGTCGGCTTTGAAAATTTTGTCAGTGGACAACCTGGGGACA
TAATGGAAATAGAAGAAAGAAATTTTGAAGTTAGAGTAGATGACTTTGAAATTGATTATAGGGATGATTATTCTGTTGAT
CAGTACTATAGCACTTTAACTGTTATGGAAGAAAATGAAGAAATAAAACAGGAAGAAATATATGTCAATAATCCTTTAAG
ATACGATGGGATAAATTTTTACCAATCAACTCACGGCTGGATGGGTGATGTACAAATAAAAAACAAAGAAACTGATATTA
CAGATGATGTTAGCCTATACGAAGAATCTCATTATCATATCACAGACAATACTACTTTGATGTTTCATTCCTTCTATCCA
GATTACCATTTAGGTCCAGATGGTCCAACCAATAAATCACCAATTCCCAATAATCCTCGTTTTATTTGGATGATTTATGA
AGGTGGAGAAATTGCTGATATGTTCGTGACTGAACCAGAAGAAGCCGTAGAATACCAAGATAAAGAAATTCAGTTTACTG
ATTATAACCAATATACTGGATTGCGTGTAGTTCATGACCCTGGAATTCCCGTTTTTTTCTTTGGAAGCTTTGTTATGGTA
GTAGGTTTGATAATGTCATTTTACATGTTTCCTAAAAGAATATGGGTAAGGGTGAAAACTAAAGACGGTTCATCTCAGCT
AATTATTGGTGGACAAGGACTTAAAGATAGACAGAGTTTTACACAGGAATTTAATGAATTAGTGGAGGATTTATCAAAAG
AGGAGAATTTATAA

Upstream 100 bases:

>100_bases
TAAATGGTACTTGACTTCGTTTATGTTTAGTGAGAATATGATAATAAGTATATTTATTATTATAATAAATATAACAATTG
ATCATGTAGGGGGTGGCAAC

Downstream 100 bases:

>100_bases
AAGCATGTTATTTAAAATAGATTGCTATCAAAATGTATAACAGTGTAAAAAAGGATGGTGAAAACCGTGACTGAGGAACA
ATTAGTGTCCTTAGAAAATA

Product: ResB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MADQEKSKQNEKDESQEQFIKKIFNFLSSMKAGILLLILVAVISSIGTFIPQEHPPEQYHEQYSELVSSIILALGLDNIF
EVWWFVGLIALLCANLFLCSLKRLPGIYRRAFYPKKILDENQLQNYNNSATIKVEDSQEEVVSKVSECFRVKKYNTEVLE
DESSGEKVLFAERGKLGYFGSFLTHLSIVILVLGFAYGNRVGFENFVSGQPGDIMEIEERNFEVRVDDFEIDYRDDYSVD
QYYSTLTVMEENEEIKQEEIYVNNPLRYDGINFYQSTHGWMGDVQIKNKETDITDDVSLYEESHYHITDNTTLMFHSFYP
DYHLGPDGPTNKSPIPNNPRFIWMIYEGGEIADMFVTEPEEAVEYQDKEIQFTDYNQYTGLRVVHDPGIPVFFFGSFVMV
VGLIMSFYMFPKRIWVRVKTKDGSSQLIIGGQGLKDRQSFTQEFNELVEDLSKEENL

Sequences:

>Translated_457_residues
MADQEKSKQNEKDESQEQFIKKIFNFLSSMKAGILLLILVAVISSIGTFIPQEHPPEQYHEQYSELVSSIILALGLDNIF
EVWWFVGLIALLCANLFLCSLKRLPGIYRRAFYPKKILDENQLQNYNNSATIKVEDSQEEVVSKVSECFRVKKYNTEVLE
DESSGEKVLFAERGKLGYFGSFLTHLSIVILVLGFAYGNRVGFENFVSGQPGDIMEIEERNFEVRVDDFEIDYRDDYSVD
QYYSTLTVMEENEEIKQEEIYVNNPLRYDGINFYQSTHGWMGDVQIKNKETDITDDVSLYEESHYHITDNTTLMFHSFYP
DYHLGPDGPTNKSPIPNNPRFIWMIYEGGEIADMFVTEPEEAVEYQDKEIQFTDYNQYTGLRVVHDPGIPVFFFGSFVMV
VGLIMSFYMFPKRIWVRVKTKDGSSQLIIGGQGLKDRQSFTQEFNELVEDLSKEENL
>Mature_456_residues
ADQEKSKQNEKDESQEQFIKKIFNFLSSMKAGILLLILVAVISSIGTFIPQEHPPEQYHEQYSELVSSIILALGLDNIFE
VWWFVGLIALLCANLFLCSLKRLPGIYRRAFYPKKILDENQLQNYNNSATIKVEDSQEEVVSKVSECFRVKKYNTEVLED
ESSGEKVLFAERGKLGYFGSFLTHLSIVILVLGFAYGNRVGFENFVSGQPGDIMEIEERNFEVRVDDFEIDYRDDYSVDQ
YYSTLTVMEENEEIKQEEIYVNNPLRYDGINFYQSTHGWMGDVQIKNKETDITDDVSLYEESHYHITDNTTLMFHSFYPD
YHLGPDGPTNKSPIPNNPRFIWMIYEGGEIADMFVTEPEEAVEYQDKEIQFTDYNQYTGLRVVHDPGIPVFFFGSFVMVV
GLIMSFYMFPKRIWVRVKTKDGSSQLIIGGQGLKDRQSFTQEFNELVEDLSKEENL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 52964; Mature: 52833

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQEKSKQNEKDESQEQFIKKIFNFLSSMKAGILLLILVAVISSIGTFIPQEHPPEQYH
CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
EQYSELVSSIILALGLDNIFEVWWFVGLIALLCANLFLCSLKRLPGIYRRAFYPKKILDE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCH
NQLQNYNNSATIKVEDSQEEVVSKVSECFRVKKYNTEVLEDESSGEKVLFAERGKLGYFG
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCCHHH
SFLTHLSIVILVLGFAYGNRVGFENFVSGQPGDIMEIEERNFEVRVDDFEIDYRDDYSVD
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCHH
QYYSTLTVMEENEEIKQEEIYVNNPLRYDGINFYQSTHGWMGDVQIKNKETDITDDVSLY
HHHHHHEEEECCHHHCHHHEEECCCEEECCCCHHHHCCCCCCEEEEECCCCCCCCCHHHH
EESHYHITDNTTLMFHSFYPDYHLGPDGPTNKSPIPNNPRFIWMIYEGGEIADMFVTEPE
HCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCH
EAVEYQDKEIQFTDYNQYTGLRVVHDPGIPVFFFGSFVMVVGLIMSFYMFPKRIWVRVKT
HHHCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
KDGSSQLIIGGQGLKDRQSFTQEFNELVEDLSKEENL
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADQEKSKQNEKDESQEQFIKKIFNFLSSMKAGILLLILVAVISSIGTFIPQEHPPEQYH
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
EQYSELVSSIILALGLDNIFEVWWFVGLIALLCANLFLCSLKRLPGIYRRAFYPKKILDE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHCCH
NQLQNYNNSATIKVEDSQEEVVSKVSECFRVKKYNTEVLEDESSGEKVLFAERGKLGYFG
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCCHHH
SFLTHLSIVILVLGFAYGNRVGFENFVSGQPGDIMEIEERNFEVRVDDFEIDYRDDYSVD
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCHH
QYYSTLTVMEENEEIKQEEIYVNNPLRYDGINFYQSTHGWMGDVQIKNKETDITDDVSLY
HHHHHHEEEECCHHHCHHHEEECCCEEECCCCHHHHCCCCCCEEEEECCCCCCCCCHHHH
EESHYHITDNTTLMFHSFYPDYHLGPDGPTNKSPIPNNPRFIWMIYEGGEIADMFVTEPE
HCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCH
EAVEYQDKEIQFTDYNQYTGLRVVHDPGIPVFFFGSFVMVVGLIMSFYMFPKRIWVRVKT
HHHCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
KDGSSQLIIGGQGLKDRQSFTQEFNELVEDLSKEENL
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA