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The map label for this gene is ccsA [H]

Identifier: 188585746

GI number: 188585746

Start: 1187476

End: 1188327

Strand: Direct

Name: ccsA [H]

Synonym: Nther_1120

Alternate gene names: 188585746

Gene position: 1187476-1188327 (Clockwise)

Preceding gene: 188585745

Following gene: 188585747

Centisome position: 37.51

GC content: 34.98

Gene sequence:

>852_bases
GTGACTGAGGAACAATTAGTGTCCTTAGAAAATACTTTGTTTGATATTACTTTTGTATTTTATTTAGTGGCTGCCTTACT
GTATATTGTAACTTATTTAATTTTTAAAAAAGAACAGAAACTTGGTAAATACGCCACTTTTATTGCGACTATGGGGTTGA
TAGTTCATACTGCTTCAATTTTTGTTAGAATGGTCAATGCAGCAAGATTAACTATGCATAATCAATTTGAGTTTGCTACC
TGGTTTGCTTGGGGAATCATGTTTTGCTATCTCTTTATTGAGAGAAAGTTTGCATACAAATATAGAGGGATTGGTTCTTT
TGTGGTTCCAATTGCTTTTTTAATGATCTTATATGCATCTACACTGCCTAGTGAAATCAGACCTCCTATGCCTGCATTAC
AAAGTGCTTGGCTATCAGTTCATGTAATAACAGCTATCCTGGGGTATGGAGCTTTTGCAGTAGCCTGTGGAATATCTATT
ATGTACTTGTTAAAGAGAAGAAAAGCAGAAGATGACAATAGTATATTTAATAGAAGCTTTTTTCCATCCTTTGAGCTTTT
GGATAATATTAATTACAGAGCAGTGGCCTTTGGCTTTATGGGACTAACCTTGTGTATTTTAACAGGAGCGATTTGGGCAG
AACAAGCTTGGGGAAGATATTGGGGTTGGGATCCTAAAGAAACCTGGTCATTAATAACTTGGATTGTTTATTCTATTTAT
TTACATGCACGGTTGACTCGTGGTTGGAAAGGAACAAAAACTGCTTGGTTTTCTATTATAGGATTTTTATGTGTGCTTTT
CACTTATGTGGGAGTTAATATGTTGCTTCCGAGTGAACACAGTTATTTGTAA

Upstream 100 bases:

>100_bases
AGTGGAGGATTTATCAAAAGAGGAGAATTTATAAAAGCATGTTATTTAAAATAGATTGCTATCAAAATGTATAACAGTGT
AAAAAAGGATGGTGAAAACC

Downstream 100 bases:

>100_bases
ATCAGTATTTGTCAGTATTGACTCCTATGGTGATTTGGAGGTGTTTTAGTGATTCTAGCAGTTATCGGAATAAATCATGA
AACCGCATCAGTAGAAACCA

Product: cytochrome c-type biogenesis protein CcsB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MTEEQLVSLENTLFDITFVFYLVAALLYIVTYLIFKKEQKLGKYATFIATMGLIVHTASIFVRMVNAARLTMHNQFEFAT
WFAWGIMFCYLFIERKFAYKYRGIGSFVVPIAFLMILYASTLPSEIRPPMPALQSAWLSVHVITAILGYGAFAVACGISI
MYLLKRRKAEDDNSIFNRSFFPSFELLDNINYRAVAFGFMGLTLCILTGAIWAEQAWGRYWGWDPKETWSLITWIVYSIY
LHARLTRGWKGTKTAWFSIIGFLCVLFTYVGVNMLLPSEHSYL

Sequences:

>Translated_283_residues
MTEEQLVSLENTLFDITFVFYLVAALLYIVTYLIFKKEQKLGKYATFIATMGLIVHTASIFVRMVNAARLTMHNQFEFAT
WFAWGIMFCYLFIERKFAYKYRGIGSFVVPIAFLMILYASTLPSEIRPPMPALQSAWLSVHVITAILGYGAFAVACGISI
MYLLKRRKAEDDNSIFNRSFFPSFELLDNINYRAVAFGFMGLTLCILTGAIWAEQAWGRYWGWDPKETWSLITWIVYSIY
LHARLTRGWKGTKTAWFSIIGFLCVLFTYVGVNMLLPSEHSYL
>Mature_282_residues
TEEQLVSLENTLFDITFVFYLVAALLYIVTYLIFKKEQKLGKYATFIATMGLIVHTASIFVRMVNAARLTMHNQFEFATW
FAWGIMFCYLFIERKFAYKYRGIGSFVVPIAFLMILYASTLPSEIRPPMPALQSAWLSVHVITAILGYGAFAVACGISIM
YLLKRRKAEDDNSIFNRSFFPSFELLDNINYRAVAFGFMGLTLCILTGAIWAEQAWGRYWGWDPKETWSLITWIVYSIYL
HARLTRGWKGTKTAWFSIIGFLCVLFTYVGVNMLLPSEHSYL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 32627; Mature: 32496

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TEEQLVSLENTLFDITFVFYLVAALLYIVTYLIFKKEQKLGKYATFIATMGLIVHTASI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVRMVNAARLTMHNQFEFATWFAWGIMFCYLFIERKFAYKYRGIGSFVVPIAFLMILYAS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TLPSEIRPPMPALQSAWLSVHVITAILGYGAFAVACGISIMYLLKRRKAEDDNSIFNRSF
HCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
FPSFELLDNINYRAVAFGFMGLTLCILTGAIWAEQAWGRYWGWDPKETWSLITWIVYSIY
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LHARLTRGWKGTKTAWFSIIGFLCVLFTYVGVNMLLPSEHSYL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA