Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
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Accession | NC_010718 |
Length | 3,165,557 |
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The map label for this gene is 188585698
Identifier: 188585698
GI number: 188585698
Start: 1128546
End: 1129718
Strand: Direct
Name: 188585698
Synonym: Nther_1071
Alternate gene names: NA
Gene position: 1128546-1129718 (Clockwise)
Preceding gene: 188585697
Following gene: 188585699
Centisome position: 35.65
GC content: 32.99
Gene sequence:
>1173_bases ATGAAATATCAATGGAAAGAATTTACAAAAGTATATTATATATTATTTTTAGTTGTGTCGACTTTATTGATTATTATTTT GCCTGGTTGTTTAGAAGGTTCCCATAATGATAATAGTAAACCTAGTGAAAAAGAAGAAAAAGTAGATAAAATAATTAAGA CTATAGAAAACCAGGGCGCTAGAGAAGCCAAAAACCAATTTTTCCAGATAGCAGAAAAAGACCAAGAAAAAGCAATGTCA ATCATGGATAAAGTAGAGGAAACCCTAGAGATTGATTTTGAAAAATTATATGAAAAGGAAAGACAAAATAGAATTAATGA AAATATTACCGAGAAAATTGAATTTGAAGATAAAGAACTATTAAGTGATTATGGTTGGACTGTTTCAGAGGCGATTAATT CATTTAATCTAAGGCTTCCTGAGAGTTTTGAGCATAAACCCGGAGAATTTCCAGAAGTAATTTACTGGGCATATAATAAC GAATTGAACAAGGATATCGGCAAGGATTTAAGACCTTATTTAGGAAATGAGGTTACCGTTAATCTTTACGACATAGAGGA AGATTTGCCAGAGTTTATGAGTCCTAGAGAAGATTCGGGTAGGGCAATTGTAGTCCGAGACCAAAATGAAATAATTGGTG CTTGGCTAGGTGCAGGCAGTCATGATGATTTTGCTTGTTCACTAAGAGGAAAACAAAGAGAAGAAATAACGGGAGAAACA TGGGAAGAATGGGTTGACTCAATTATTGATGCAGATAATCCAAAAGAAAGAGAGCTTAACAAGTTAGGAGCCCAAGAAAT TATTGAAAAATATTGGGAGGCAGCAGATAAAGGTGAATATAGCAAAGCTTATTCTCTTCTAAGTAGATGTAATTTAAGAA GTTATCTATTTTCAAATATGGATAATCGGGAACTATATAATCAAAGTTTTAATCAAGGAGTAATAGGTGGGCTTTATAAT ATTGAATCAGTAGAATTACTAGAGGTGGAAAAACAAGAGCATTATGAAACTAACCATGATTCTAGAGACAAAAAGCAATT TAAAGTAACAGTTGATAAAACAGTAAAAGATAAAATTACTCATGGCAGCGGAAAACAACCACGTTTTATGACTTTAGTTA GAGAAACTCCTGAAACGGGATGGCGAATTTCTGGTATAGGTACAGGCCCATAG
Upstream 100 bases:
>100_bases TATTAAGCTAAATATTGATAACCAGGATTTTACGATAAACAGCATCATAAAACCACTGCTTTAGTTTTGAGAGCATATCA AAGGGAGGACTATACGCTTT
Downstream 100 bases:
>100_bases GAGCTTTTTAAATCACTGGGCTAAGTTATAAACTTGTCATAAAATATATTTGGGGGATAATATTAAAGTTATGATTAACT TGGGAGGAATATAAATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKYQWKEFTKVYYILFLVVSTLLIIILPGCLEGSHNDNSKPSEKEEKVDKIIKTIENQGAREAKNQFFQIAEKDQEKAMS IMDKVEETLEIDFEKLYEKERQNRINENITEKIEFEDKELLSDYGWTVSEAINSFNLRLPESFEHKPGEFPEVIYWAYNN ELNKDIGKDLRPYLGNEVTVNLYDIEEDLPEFMSPREDSGRAIVVRDQNEIIGAWLGAGSHDDFACSLRGKQREEITGET WEEWVDSIIDADNPKERELNKLGAQEIIEKYWEAADKGEYSKAYSLLSRCNLRSYLFSNMDNRELYNQSFNQGVIGGLYN IESVELLEVEKQEHYETNHDSRDKKQFKVTVDKTVKDKITHGSGKQPRFMTLVRETPETGWRISGIGTGP
Sequences:
>Translated_390_residues MKYQWKEFTKVYYILFLVVSTLLIIILPGCLEGSHNDNSKPSEKEEKVDKIIKTIENQGAREAKNQFFQIAEKDQEKAMS IMDKVEETLEIDFEKLYEKERQNRINENITEKIEFEDKELLSDYGWTVSEAINSFNLRLPESFEHKPGEFPEVIYWAYNN ELNKDIGKDLRPYLGNEVTVNLYDIEEDLPEFMSPREDSGRAIVVRDQNEIIGAWLGAGSHDDFACSLRGKQREEITGET WEEWVDSIIDADNPKERELNKLGAQEIIEKYWEAADKGEYSKAYSLLSRCNLRSYLFSNMDNRELYNQSFNQGVIGGLYN IESVELLEVEKQEHYETNHDSRDKKQFKVTVDKTVKDKITHGSGKQPRFMTLVRETPETGWRISGIGTGP >Mature_390_residues MKYQWKEFTKVYYILFLVVSTLLIIILPGCLEGSHNDNSKPSEKEEKVDKIIKTIENQGAREAKNQFFQIAEKDQEKAMS IMDKVEETLEIDFEKLYEKERQNRINENITEKIEFEDKELLSDYGWTVSEAINSFNLRLPESFEHKPGEFPEVIYWAYNN ELNKDIGKDLRPYLGNEVTVNLYDIEEDLPEFMSPREDSGRAIVVRDQNEIIGAWLGAGSHDDFACSLRGKQREEITGET WEEWVDSIIDADNPKERELNKLGAQEIIEKYWEAADKGEYSKAYSLLSRCNLRSYLFSNMDNRELYNQSFNQGVIGGLYN IESVELLEVEKQEHYETNHDSRDKKQFKVTVDKTVKDKITHGSGKQPRFMTLVRETPETGWRISGIGTGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45378; Mature: 45378
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQWKEFTKVYYILFLVVSTLLIIILPGCLEGSHNDNSKPSEKEEKVDKIIKTIENQGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCH REAKNQFFQIAEKDQEKAMSIMDKVEETLEIDFEKLYEKERQNRINENITEKIEFEDKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LSDYGWTVSEAINSFNLRLPESFEHKPGEFPEVIYWAYNNELNKDIGKDLRPYLGNEVTV HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEE NLYDIEEDLPEFMSPREDSGRAIVVRDQNEIIGAWLGAGSHDDFACSLRGKQREEITGET EEEECHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCEEEECCCCCHHHCCCCH WEEWVDSIIDADNPKERELNKLGAQEIIEKYWEAADKGEYSKAYSLLSRCNLRSYLFSNM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC DNRELYNQSFNQGVIGGLYNIESVELLEVEKQEHYETNHDSRDKKQFKVTVDKTVKDKIT CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHC HGSGKQPRFMTLVRETPETGWRISGIGTGP CCCCCCCHHHHHHHHCCCCCEEEECCCCCC >Mature Secondary Structure MKYQWKEFTKVYYILFLVVSTLLIIILPGCLEGSHNDNSKPSEKEEKVDKIIKTIENQGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCH REAKNQFFQIAEKDQEKAMSIMDKVEETLEIDFEKLYEKERQNRINENITEKIEFEDKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LSDYGWTVSEAINSFNLRLPESFEHKPGEFPEVIYWAYNNELNKDIGKDLRPYLGNEVTV HHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEE NLYDIEEDLPEFMSPREDSGRAIVVRDQNEIIGAWLGAGSHDDFACSLRGKQREEITGET EEEECHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCEEEECCCCCHHHCCCCH WEEWVDSIIDADNPKERELNKLGAQEIIEKYWEAADKGEYSKAYSLLSRCNLRSYLFSNM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC DNRELYNQSFNQGVIGGLYNIESVELLEVEKQEHYETNHDSRDKKQFKVTVDKTVKDKIT CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHC HGSGKQPRFMTLVRETPETGWRISGIGTGP CCCCCCCHHHHHHHHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA