Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
---|---|
Accession | NC_010718 |
Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is nitA [H]
Identifier: 188585699
GI number: 188585699
Start: 1129814
End: 1130743
Strand: Direct
Name: nitA [H]
Synonym: Nther_1072
Alternate gene names: 188585699
Gene position: 1129814-1130743 (Clockwise)
Preceding gene: 188585698
Following gene: 188585701
Centisome position: 35.69
GC content: 36.02
Gene sequence:
>930_bases TTGAAAACCAATCAATATGTAAGAACAGCAGTAATTCAAGCAGCACCAATTATAATGGATAGAGAGAAAACTTTAAATAA AGCTTTGGATTTAATCAAAGAAGCGAAAAATGAACAAGCTGAAATAGTGGTTTTTCCTGAAGCCTTTATACCCGCTTATC CACGAGGGCTTTCCTTTGGATATTTAGTAGGAAGTCGGACAATGGAAGGAAGAAACGATTTTTTGAGATATTATAAAAAT GCTGTCCCAGTTCCTGGTGATACTACTGAAAAATTGGGAGAAGCAGCAAGAAAAGCAGGAATTTATTTAGTGATTGGAGT TACGGAAATTGATACTGAAAAAAATAATAACACTTTATATTGTACAATTTTGTACTTTGGCCCCGATGGAAGACTTTTAG ATAAGCATCAAAAATTAAAACCTACTGGGTCTGAAAGACTTATATGGGGAGAAGGGGATGGTAGTACGCTATCAGTTGTA AATACTCCCCATGGTAAATTAGGTGGTTTGATTTGCTGGGAAAATTACATGCCTCTTGCACGAACCGCTATGTATCAAAA AGGTGTCAGTTTATATGTTGCTCCCACAGCAGATGCCAGATCAGTTTGGCAATCAACTATTAGGCATATAGCCTTAGAAG GCAGATGTTATGTGCTGTCTTGTAATCAGTTTGTAACCAAGGATATGTATCCTGATGATCTTGAATATTATCATGAACTA CAAAATCAGCCCAATATTATGTGTTCAGGAGGTAGTGCCATAGTCAATCCTATGGGTGAATATGTAGTGGAACCTGTGTA TAATAAGGAAGAAATGTTGTTGGCAGACTTGAATATGGATCTAGTTATAAAAGGAAAGATGGACTTTGATGTAGTTGGTC ACTATGACCGAACTGATGTATTTCAGCTGAAAATAAATGAAAATGAATAA
Upstream 100 bases:
>100_bases CATAGGAGCTTTTTAAATCACTGGGCTAAGTTATAAACTTGTCATAAAATATATTTGGGGGATAATATTAAAGTTATGAT TAACTTGGGAGGAATATAAA
Downstream 100 bases:
>100_bases GAAGTAGTTATTCTATAAGTAAGGCCAATTCTAAGGTCAATTTAGTCAATTTAAGCTATTTGAGATCAATCAGTTTTACT TGGATTTGAGATTTAAAGTA
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKTNQYVRTAVIQAAPIIMDREKTLNKALDLIKEAKNEQAEIVVFPEAFIPAYPRGLSFGYLVGSRTMEGRNDFLRYYKN AVPVPGDTTEKLGEAARKAGIYLVIGVTEIDTEKNNNTLYCTILYFGPDGRLLDKHQKLKPTGSERLIWGEGDGSTLSVV NTPHGKLGGLICWENYMPLARTAMYQKGVSLYVAPTADARSVWQSTIRHIALEGRCYVLSCNQFVTKDMYPDDLEYYHEL QNQPNIMCSGGSAIVNPMGEYVVEPVYNKEEMLLADLNMDLVIKGKMDFDVVGHYDRTDVFQLKINENE
Sequences:
>Translated_309_residues MKTNQYVRTAVIQAAPIIMDREKTLNKALDLIKEAKNEQAEIVVFPEAFIPAYPRGLSFGYLVGSRTMEGRNDFLRYYKN AVPVPGDTTEKLGEAARKAGIYLVIGVTEIDTEKNNNTLYCTILYFGPDGRLLDKHQKLKPTGSERLIWGEGDGSTLSVV NTPHGKLGGLICWENYMPLARTAMYQKGVSLYVAPTADARSVWQSTIRHIALEGRCYVLSCNQFVTKDMYPDDLEYYHEL QNQPNIMCSGGSAIVNPMGEYVVEPVYNKEEMLLADLNMDLVIKGKMDFDVVGHYDRTDVFQLKINENE >Mature_309_residues MKTNQYVRTAVIQAAPIIMDREKTLNKALDLIKEAKNEQAEIVVFPEAFIPAYPRGLSFGYLVGSRTMEGRNDFLRYYKN AVPVPGDTTEKLGEAARKAGIYLVIGVTEIDTEKNNNTLYCTILYFGPDGRLLDKHQKLKPTGSERLIWGEGDGSTLSVV NTPHGKLGGLICWENYMPLARTAMYQKGVSLYVAPTADARSVWQSTIRHIALEGRCYVLSCNQFVTKDMYPDDLEYYHEL QNQPNIMCSGGSAIVNPMGEYVVEPVYNKEEMLLADLNMDLVIKGKMDFDVVGHYDRTDVFQLKINENE
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=313, Percent_Identity=26.517571884984, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17557111, Length=301, Percent_Identity=45.8471760797342, Blast_Score=283, Evalue=7e-77, Organism=Saccharomyces cerevisiae, GI6322027, Length=197, Percent_Identity=42.6395939086294, Blast_Score=162, Evalue=7e-41, Organism=Saccharomyces cerevisiae, GI6322026, Length=110, Percent_Identity=35.4545454545455, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6323383, Length=298, Percent_Identity=25.1677852348993, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 34815; Mature: 34815
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNQYVRTAVIQAAPIIMDREKTLNKALDLIKEAKNEQAEIVVFPEAFIPAYPRGLSFG CCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCEEE YLVGSRTMEGRNDFLRYYKNAVPVPGDTTEKLGEAARKAGIYLVIGVTEIDTEKNNNTLY EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCEEE CTILYFGPDGRLLDKHQKLKPTGSERLIWGEGDGSTLSVVNTPHGKLGGLICWENYMPLA EEEEEECCCCCEECCHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCHH RTAMYQKGVSLYVAPTADARSVWQSTIRHIALEGRCYVLSCNQFVTKDMYPDDLEYYHEL HHHHHHCCCEEEEECCCCHHHHHHHHHHHEEECCEEEEEECCHHHHCCCCCCHHHHHHHH QNQPNIMCSGGSAIVNPMGEYVVEPVYNKEEMLLADLNMDLVIKGKMDFDVVGHYDRTDV CCCCCEEECCCCHHHCCCHHHHCCCCCCCCEEEEEECCCCEEEECCCCEEEECCCCCCEE FQLKINENE EEEEECCCC >Mature Secondary Structure MKTNQYVRTAVIQAAPIIMDREKTLNKALDLIKEAKNEQAEIVVFPEAFIPAYPRGLSFG CCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCEEE YLVGSRTMEGRNDFLRYYKNAVPVPGDTTEKLGEAARKAGIYLVIGVTEIDTEKNNNTLY EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCEEE CTILYFGPDGRLLDKHQKLKPTGSERLIWGEGDGSTLSVVNTPHGKLGGLICWENYMPLA EEEEEECCCCCEECCHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCHH RTAMYQKGVSLYVAPTADARSVWQSTIRHIALEGRCYVLSCNQFVTKDMYPDDLEYYHEL HHHHHHCCCEEEEECCCCHHHHHHHHHHHEEECCEEEEEECCHHHHCCCCCCHHHHHHHH QNQPNIMCSGGSAIVNPMGEYVVEPVYNKEEMLLADLNMDLVIKGKMDFDVVGHYDRTDV CCCCCEEECCCCHHHCCCHHHHCCCCCCCCEEEEEECCCCEEEECCCCEEEECCCCCCEE FQLKINENE EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]