Click here to switch to the map view.

The map label for this gene is yhiD [H]

Identifier: 188584783

GI number: 188584783

Start: 164021

End: 164728

Strand: Direct

Name: yhiD [H]

Synonym: Nther_0141

Alternate gene names: 188584783

Gene position: 164021-164728 (Clockwise)

Preceding gene: 188584781

Following gene: 188584784

Centisome position: 5.18

GC content: 40.4

Gene sequence:

>708_bases
ATGATATCACCTTTTGAAATAGTACTTCGATTAGTTTTGGGCGGAATACTGGGAGGAGTAGTTGGTTTTGAAAGGGAACA
ACATAACCGGCCTGCAGGATTTAGAACTCATATTTTAGTGTGTGTAGGAGCTACCTTAATTATGCTAGTTTCAATATATA
CTTTTACAGGTCCGGAAGGTGAAATAAGCAGAGGTGCTGATACGGCGCGTATAGCCGCCCAGGTGGTTAGTGGAGTTGGG
TTTCTAGGTGCAGGTACTATTTTGCGACAAGGAAGTACCATAAGAGGTTTAACCACTGCGGCTAGTCTTTGGGTGGTCGC
CGGTATTGGGTTAGCAGTTGGTGGTGGTTTTTATTTAGGAGCCTTTACTGCTACAGCTGTGGTAATGGTTAGTCTGTACA
TTTTAGGGAATGTGGAACGATTTTTAGCACAGAAAAGACGCTTAAAAGAACTGTGGGTCAGGGTAATCGATCGTCCAGGT
CAATTAGCTAAAATCTCTAGTCTTATTGCAGAGAGAAATGTAAATATTCACAAAGTAGAAATGACAGAACCCGAATACAT
GGAAGGATATCAGGTAAAAGCTATTGATATCACATTATTATTAAAAGTACCTACCAGGTTGGATGACAATGAATTTTTAT
CTGCAATTATGGAAATGGAAGGTGTTCTTGAGCTCAGTTGGGAAGGAAAGAACGTTAATGAAGGATAA

Upstream 100 bases:

>100_bases
GTTTATAAGGAGGTTTCATATTTTTGAACGGGGGGTGTTTATGCAACATATTTTTATACATATTTAATACACCTCCATAT
AGAGAATAAGGGGGAATTTT

Downstream 100 bases:

>100_bases
GATGGTGACCCTAGCAGGTAGTTTTACGACTACCTGCTTTTTCATTGTGCGCCATGCATGACGATTAGCTAGGTGGTGTA
AGTCCACTATGGGGGTTTGT

Product: MgtC/SapB transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MISPFEIVLRLVLGGILGGVVGFEREQHNRPAGFRTHILVCVGATLIMLVSIYTFTGPEGEISRGADTARIAAQVVSGVG
FLGAGTILRQGSTIRGLTTAASLWVVAGIGLAVGGGFYLGAFTATAVVMVSLYILGNVERFLAQKRRLKELWVRVIDRPG
QLAKISSLIAERNVNIHKVEMTEPEYMEGYQVKAIDITLLLKVPTRLDDNEFLSAIMEMEGVLELSWEGKNVNEG

Sequences:

>Translated_235_residues
MISPFEIVLRLVLGGILGGVVGFEREQHNRPAGFRTHILVCVGATLIMLVSIYTFTGPEGEISRGADTARIAAQVVSGVG
FLGAGTILRQGSTIRGLTTAASLWVVAGIGLAVGGGFYLGAFTATAVVMVSLYILGNVERFLAQKRRLKELWVRVIDRPG
QLAKISSLIAERNVNIHKVEMTEPEYMEGYQVKAIDITLLLKVPTRLDDNEFLSAIMEMEGVLELSWEGKNVNEG
>Mature_235_residues
MISPFEIVLRLVLGGILGGVVGFEREQHNRPAGFRTHILVCVGATLIMLVSIYTFTGPEGEISRGADTARIAAQVVSGVG
FLGAGTILRQGSTIRGLTTAASLWVVAGIGLAVGGGFYLGAFTATAVVMVSLYILGNVERFLAQKRRLKELWVRVIDRPG
QLAKISSLIAERNVNIHKVEMTEPEYMEGYQVKAIDITLLLKVPTRLDDNEFLSAIMEMEGVLELSWEGKNVNEG

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=207, Percent_Identity=36.231884057971, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25445; Mature: 25445

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPFEIVLRLVLGGILGGVVGFEREQHNRPAGFRTHILVCVGATLIMLVSIYTFTGPEG
CCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
EISRGADTARIAAQVVSGVGFLGAGTILRQGSTIRGLTTAASLWVVAGIGLAVGGGFYLG
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
AFTATAVVMVSLYILGNVERFLAQKRRLKELWVRVIDRPGQLAKISSLIAERNVNIHKVE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEE
MTEPEYMEGYQVKAIDITLLLKVPTRLDDNEFLSAIMEMEGVLELSWEGKNVNEG
CCCCHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure
MISPFEIVLRLVLGGILGGVVGFEREQHNRPAGFRTHILVCVGATLIMLVSIYTFTGPEG
CCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
EISRGADTARIAAQVVSGVGFLGAGTILRQGSTIRGLTTAASLWVVAGIGLAVGGGFYLG
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
AFTATAVVMVSLYILGNVERFLAQKRRLKELWVRVIDRPGQLAKISSLIAERNVNIHKVE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEE
MTEPEYMEGYQVKAIDITLLLKVPTRLDDNEFLSAIMEMEGVLELSWEGKNVNEG
CCCCHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]