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The map label for this gene is opuCC [H]

Identifier: 188584763

GI number: 188584763

Start: 144228

End: 145169

Strand: Direct

Name: opuCC [H]

Synonym: Nther_0121

Alternate gene names: 188584763

Gene position: 144228-145169 (Clockwise)

Preceding gene: 188584762

Following gene: 188584764

Centisome position: 4.56

GC content: 40.45

Gene sequence:

>942_bases
ATGAAAATGAAGAATCTAGCGATAACTTTAGTTATCCTAAGTATGATGTTGGTTGGTGTAGGTTGTGGTCAAGATGGGGA
GGTTCAGCAAGACGGAGATGCTGTTATTGCCGTAGGTTCCAAGGAGTTCACAGAGCAATTGATACTAGGTCAGCTCACTA
TTCAACTATTGGAAGAAGAAGGTTATGATGTGATTGACAATACAGGTTTATCTGGTACTGCAATATTGAGAGATGCTTTT
TTAGATGGTGAAGTTGATGTGAAATGGGAATACACGGGAACAGCTTTAATTTCTCACCTGGGTCACGATGAGGCTATCAC
AGACAGTGAAGAGTGCTATGAAGCTGTTAAAGAAGAAGATCTGGAAGAGAACGGAGTCGTTTGGCTTGATTATGCGGGAC
TTGATAATACTTATACATTAATTATGAGAGAAGATTATGCTGAAGAAGCCGGTATCCAATCTATGAGCGATTTAGCTGAA
GCTGTTAATGAAGGAGAAACCCCACCCACTGGAGGAGAATGGGTTTTAGCTAGTAATGAGGAATATGCCACTCGAGATGA
TGGCATGGAAGGAGTCGAAGAAACATACGGATTTGAATTTGAAGATGTGGATATCATGGAACCGGGCATTATCTACGGAG
TTGTACGAGATGGGGAAGCACCTGTTGGTATGGGTTTTATGACTGATGGCAGGATCGATGGATATGATTTGATAACCTTA
GAAGACGATAAAGGCTTTCATCCGGCTTATAATGCGGCACCTAATGTAAGAGAAGAAGTCTTGGATGAACATCCGGAGTT
AGAAGATATTTTAGCAAAATTGACTGAACGTCTTGATAATGAAACAATGCAACAATTAAATGCTAAGGTTGATATTGATG
GCTATCAACCAGAGGAAGCAGCCGAAGAATATTTAGTTGAAGAGGGTTTGATTTCCGAATAA

Upstream 100 bases:

>100_bases
TTTAACTCAAGAAGCTTATGATGAGGACGAGGTCGACGAAAATTAGTTACAATTTGTTTCAACTTCTTTCAAACATTAAA
AATGGATAAGGGGGAAAAGG

Downstream 100 bases:

>100_bases
TGAATTTTTAAATTAAGCGCTGTTAAATTTATTTGTTGATACTGTAAAACTTACATGGAACTTTAATACAACTCTAAAAA
GTGTATTAAAAGATTAGGGC

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKMKNLAITLVILSMMLVGVGCGQDGEVQQDGDAVIAVGSKEFTEQLILGQLTIQLLEEEGYDVIDNTGLSGTAILRDAF
LDGEVDVKWEYTGTALISHLGHDEAITDSEECYEAVKEEDLEENGVVWLDYAGLDNTYTLIMREDYAEEAGIQSMSDLAE
AVNEGETPPTGGEWVLASNEEYATRDDGMEGVEETYGFEFEDVDIMEPGIIYGVVRDGEAPVGMGFMTDGRIDGYDLITL
EDDKGFHPAYNAAPNVREEVLDEHPELEDILAKLTERLDNETMQQLNAKVDIDGYQPEEAAEEYLVEEGLISE

Sequences:

>Translated_313_residues
MKMKNLAITLVILSMMLVGVGCGQDGEVQQDGDAVIAVGSKEFTEQLILGQLTIQLLEEEGYDVIDNTGLSGTAILRDAF
LDGEVDVKWEYTGTALISHLGHDEAITDSEECYEAVKEEDLEENGVVWLDYAGLDNTYTLIMREDYAEEAGIQSMSDLAE
AVNEGETPPTGGEWVLASNEEYATRDDGMEGVEETYGFEFEDVDIMEPGIIYGVVRDGEAPVGMGFMTDGRIDGYDLITL
EDDKGFHPAYNAAPNVREEVLDEHPELEDILAKLTERLDNETMQQLNAKVDIDGYQPEEAAEEYLVEEGLISE
>Mature_313_residues
MKMKNLAITLVILSMMLVGVGCGQDGEVQQDGDAVIAVGSKEFTEQLILGQLTIQLLEEEGYDVIDNTGLSGTAILRDAF
LDGEVDVKWEYTGTALISHLGHDEAITDSEECYEAVKEEDLEENGVVWLDYAGLDNTYTLIMREDYAEEAGIQSMSDLAE
AVNEGETPPTGGEWVLASNEEYATRDDGMEGVEETYGFEFEDVDIMEPGIIYGVVRDGEAPVGMGFMTDGRIDGYDLITL
EDDKGFHPAYNAAPNVREEVLDEHPELEDILAKLTERLDNETMQQLNAKVDIDGYQPEEAAEEYLVEEGLISE

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=282, Percent_Identity=32.9787234042553, Blast_Score=161, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34507; Mature: 34507

Theoretical pI: Translated: 3.55; Mature: 3.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKNLAITLVILSMMLVGVGCGQDGEVQQDGDAVIAVGSKEFTEQLILGQLTIQLLEEE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC
GYDVIDNTGLSGTAILRDAFLDGEVDVKWEYTGTALISHLGHDEAITDSEECYEAVKEED
CCCEECCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
LEENGVVWLDYAGLDNTYTLIMREDYAEEAGIQSMSDLAEAVNEGETPPTGGEWVLASNE
CCCCCEEEEEECCCCCEEEEEEECCHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEECCC
EYATRDDGMEGVEETYGFEFEDVDIMEPGIIYGVVRDGEAPVGMGFMTDGRIDGYDLITL
CCCCCCCCHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCCCCEEECCCCCCEEEEEE
EDDKGFHPAYNAAPNVREEVLDEHPELEDILAKLTERLDNETMQQLNAKVDIDGYQPEEA
ECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH
AEEYLVEEGLISE
HHHHHHHCCCCCC
>Mature Secondary Structure
MKMKNLAITLVILSMMLVGVGCGQDGEVQQDGDAVIAVGSKEFTEQLILGQLTIQLLEEE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC
GYDVIDNTGLSGTAILRDAFLDGEVDVKWEYTGTALISHLGHDEAITDSEECYEAVKEED
CCCEECCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
LEENGVVWLDYAGLDNTYTLIMREDYAEEAGIQSMSDLAEAVNEGETPPTGGEWVLASNE
CCCCCEEEEEECCCCCEEEEEEECCHHHHHCHHHHHHHHHHHHCCCCCCCCCCEEEECCC
EYATRDDGMEGVEETYGFEFEDVDIMEPGIIYGVVRDGEAPVGMGFMTDGRIDGYDLITL
CCCCCCCCHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCCCCEEECCCCCCEEEEEE
EDDKGFHPAYNAAPNVREEVLDEHPELEDILAKLTERLDNETMQQLNAKVDIDGYQPEEA
ECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHH
AEEYLVEEGLISE
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]