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The map label for this gene is 188527545

Identifier: 188527545

GI number: 188527545

Start: 748948

End: 750381

Strand: Reverse

Name: 188527545

Synonym: HPSH_03835

Alternate gene names: NA

Gene position: 750381-748948 (Counterclockwise)

Preceding gene: 188527546

Following gene: 188527544

Centisome position: 46.65

GC content: 39.19

Gene sequence:

>1434_bases
ATGAAAACTATTATAAGATATGTTAGTTTATGGGGCTTGTGTGCAGTTTTAGCTCTAGCCCAAGCCCCCTCTAAAACCCC
AGATGAAATCAAGCAAATCCTTAACAATTACAGCCATAAGAATTTAAAGCTCATTGATCCGCCGACAAGTTCTTTAGAAG
CAACACCGAGTTTTTTGCCCTCATCTAAAGAAACAGCGACCACCATCAATCAAGAGATTGCTAAATACCATGAAAAAAGC
GATAAAGCCGCTTTGGGGCTTTATGAATTGCTAAAGGGGGCTACCACTAATCTCAGTTTGCAAGCGCAAGAACTCAGTGT
CAAGCAAGCGATGAAAAACCATACCATCGCAAAAGCGATGTTTTTGCCCACTCTTAATATGAACTATAACTTTAAAAATG
AAAATAGGGACACTCCGCATTTTAAACGCTACAACACGCAACAACTCCAGGCTGAAGTCAAATTGAATGTGTTTAATGGT
TTTAGCGATGTGAACAATGTCAAAGAAAAGTCTGCGACTTACCGATCCACTGTGGCTAATTTAGAGTATAGCCGCCAGAG
CGTGTATTTGCAAGTGGTGCAACAATATTATGAGTATTTTAACAATCTCGCTCGCATGATCGCTTTACAAAAGAAATTAG
AGCAAATCAAAACAGACATTAAAAGGGTTACCAAGCTCTATGACAAAGGGCTAACCACGATTGATGATTTGCAAAGCTTA
AAAGCGCAAGGGAATTTGAGCGAATACGATATTTTGGACATACAATTTGCTTTGGAGCAAAACCGCTTGACTTTAGAATA
TCTCACTAACCTCAGTGTGAAAAATTTAAAAAAGACTACGATTGATGCGCCTAATTTGCAATTGAGAGAAAGGCAAGATC
TAGTCTCTTTAAGGGAGCAGATTTCTGCACTCAAATACCAAAACAAGCAACTCAATTACTACCCTACGGTGGATGTCTAT
GACTCATGGCTTTATTGGATCCAAAAACCCGCTTACGCTTTGGGGAGTTTTGGGAACTTCTTCCCTGGTCAGCAAAATAC
GGCTGGGGTTACTGCGAGCATGAAATTTTTTGATGATATAGGGTTGAGTTTGCAAAAACAATCCATCATGCTAGGCCGAT
TAGCGAATGAAAAGAATTTAGCGTATAAAAAATTAGAGCAAGAAAAAGACGAACAGCTTTACAGGAAGTCGCTTGATATT
GCCAGAGCCAAGATTGAATCTTCAAAGGCTAGTTTGGATGCGGCTAATCTTTCTTTTGCCAATATTAAAAGGAAATATGA
CGCTAATTTAGTGGATTTCACCACCTATTTAAGGGGCTTAACCACGCGCTTTGATGCAGAAGTGGCTTACAATTTAGCGC
TCAACAATTATGAAGTGCAAAAAGCCAATTACATTTTCAACAGCGGGCATAAAATAGACGACTATGTGCATTAA

Upstream 100 bases:

>100_bases
TTTAATTTAGGGCATGGGATGTTACCGGATTTACCCAGAGAAAACGCGAAATATTTAGTGCAATTAGTGCATGCTAAAAC
CAGGCGATAGGGGGGGATTG

Downstream 100 bases:

>100_bases
GGGATAAAAATGATACGAAAAATTTTAATGGGACTTTTTTTGAGTCTTTTGAGTTTGGAAGCTGGCGAAAAAGTGTATGC
GATTTTCAATGTGAAAGCGG

Product: outer-membrane protein of the hefABC efflux system HefA

Products: NA

Alternate protein names: Outer Membrane Component Of Efflux System; Outer-Membrane Protein Of HefABC Efflux System HefA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKTIIRYVSLWGLCAVLALAQAPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLPSSKETATTINQEIAKYHEKS
DKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLNMNYNFKNENRDTPHFKRYNTQQLQAEVKLNVFNG
FSDVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
KAQGNLSEYDILDIQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALKYQNKQLNYYPTVDVY
DSWLYWIQKPAYALGSFGNFFPGQQNTAGVTASMKFFDDIGLSLQKQSIMLGRLANEKNLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH

Sequences:

>Translated_477_residues
MKTIIRYVSLWGLCAVLALAQAPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLPSSKETATTINQEIAKYHEKS
DKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLNMNYNFKNENRDTPHFKRYNTQQLQAEVKLNVFNG
FSDVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
KAQGNLSEYDILDIQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALKYQNKQLNYYPTVDVY
DSWLYWIQKPAYALGSFGNFFPGQQNTAGVTASMKFFDDIGLSLQKQSIMLGRLANEKNLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
>Mature_477_residues
MKTIIRYVSLWGLCAVLALAQAPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLPSSKETATTINQEIAKYHEKS
DKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAMFLPTLNMNYNFKNENRDTPHFKRYNTQQLQAEVKLNVFNG
FSDVNNVKEKSATYRSTVANLEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
KAQGNLSEYDILDIQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQISALKYQNKQLNYYPTVDVY
DSWLYWIQKPAYALGSFGNFFPGQQNTAGVTASMKFFDDIGLSLQKQSIMLGRLANEKNLAYKKLEQEKDEQLYRKSLDI
ARAKIESSKASLDAANLSFANIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54706; Mature: 54706

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIIRYVSLWGLCAVLALAQAPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLP
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
SSKETATTINQEIAKYHEKSDKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAM
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
FLPTLNMNYNFKNENRDTPHFKRYNTQQLQAEVKLNVFNGFSDVNNVKEKSATYRSTVAN
HCCEECCCCCCCCCCCCCCCHHCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
LEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAQGNLSEYDILDIQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQ
HHCCCCCCCEEEEEEEECCCCCEEHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ISALKYQNKQLNYYPTVDVYDSWLYWIQKPAYALGSFGNFFPGQQNTAGVTASMKFFDDI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
GLSLQKQSIMLGRLANEKNLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
NIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEHHHEEECCCCCCCCCCC
>Mature Secondary Structure
MKTIIRYVSLWGLCAVLALAQAPSKTPDEIKQILNNYSHKNLKLIDPPTSSLEATPSFLP
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCC
SSKETATTINQEIAKYHEKSDKAALGLYELLKGATTNLSLQAQELSVKQAMKNHTIAKAM
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
FLPTLNMNYNFKNENRDTPHFKRYNTQQLQAEVKLNVFNGFSDVNNVKEKSATYRSTVAN
HCCEECCCCCCCCCCCCCCCHHCCCHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
LEYSRQSVYLQVVQQYYEYFNNLARMIALQKKLEQIKTDIKRVTKLYDKGLTTIDDLQSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAQGNLSEYDILDIQFALEQNRLTLEYLTNLSVKNLKKTTIDAPNLQLRERQDLVSLREQ
HHCCCCCCCEEEEEEEECCCCCEEHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ISALKYQNKQLNYYPTVDVYDSWLYWIQKPAYALGSFGNFFPGQQNTAGVTASMKFFDDI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
GLSLQKQSIMLGRLANEKNLAYKKLEQEKDEQLYRKSLDIARAKIESSKASLDAANLSFA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
NIKRKYDANLVDFTTYLRGLTTRFDAEVAYNLALNNYEVQKANYIFNSGHKIDDYVH
HHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA