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The map label for this gene is 188527544

Identifier: 188527544

GI number: 188527544

Start: 748234

End: 748938

Strand: Reverse

Name: 188527544

Synonym: HPSH_03830

Alternate gene names: NA

Gene position: 748938-748234 (Counterclockwise)

Preceding gene: 188527545

Following gene: 188527543

Centisome position: 46.56

GC content: 40.85

Gene sequence:

>705_bases
ATGATACGAAAAATTTTAATGGGACTTTTTTTGAGTCTTTTGAGTTTGGAAGCTGGCGAAAAAGTGTATGCGATTTTCAA
TGTGAAAGCGGTGCAAGACTCCAAACTCACTCTGGATAGCACAGGGATTGTGGATAGCATTAAGGTTACTGAGGGGAGCG
TGGTCAAAAAGGGCGATGTTTTGTTACTTTTGTATAATCAAGACAAACAGGCTCAAAGCGATTCTACCGAGCAACAACTC
ATTTTCGCTAAAAAGCAATACCAACGATACAGCAAAATTGGGGGCGCTGTGGATAGAAACACTCTAGAGAGTTATGAGTT
CAATTACAGGCGTTTGGAATCAGATTACGCTTATTCTATTGCGCTATTGAATAAAACCATTTTAAGGGCCCCTTTTGATG
GCGTAATAGCGAGTAAAAACATTCAAGTGGGCGAAGGGGTGAGCGCGAATAGCACGGTGTTATTGAGATTAGTCAGCCAT
GCTAGGAAATTGGTCATTGAATTTGATTCTAAATATATTAATGCAGTCAAAGTGGGGGACACTTACACTTATTCTATAGA
CGGGGATTCCAATCAGCATGAAGCTAAAATCACTAAGATTTACCCCACGGTTGATGAAAACACCAGAAAAGTGAGCGCTG
AAGCCCTTTTATCTAAGCCTATGGCAGTGGGGCTTTTTGGCGATGGGTTTATCCAAACGAAATAA

Upstream 100 bases:

>100_bases
GGCTTACAATTTAGCGCTCAACAATTATGAAGTGCAAAAAGCCAATTACATTTTCAACAGCGGGCATAAAATAGACGACT
ATGTGCATTAAGGGATAAAA

Downstream 100 bases:

>100_bases
TAGGGTATTTTGATGTATAAAACAGCGATTAATCGTCCTATTACGACCTTGATGTTCGCTTTGGCGATTGTCTTTTTTGG
GACTATGGGGTTTAAAAAAT

Product: membrane fusion protein of the hefABC efflux system HefB

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIRKILMGLFLSLLSLEAGEKVYAIFNVKAVQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQL
IFAKKQYQRYSKIGGAVDRNTLESYEFNYRRLESDYAYSIALLNKTILRAPFDGVIASKNIQVGEGVSANSTVLLRLVSH
ARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK

Sequences:

>Translated_234_residues
MIRKILMGLFLSLLSLEAGEKVYAIFNVKAVQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQL
IFAKKQYQRYSKIGGAVDRNTLESYEFNYRRLESDYAYSIALLNKTILRAPFDGVIASKNIQVGEGVSANSTVLLRLVSH
ARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK
>Mature_234_residues
MIRKILMGLFLSLLSLEAGEKVYAIFNVKAVQDSKLTLDSTGIVDSIKVTEGSVVKKGDVLLLLYNQDKQAQSDSTEQQL
IFAKKQYQRYSKIGGAVDRNTLESYEFNYRRLESDYAYSIALLNKTILRAPFDGVIASKNIQVGEGVSANSTVLLRLVSH
ARKLVIEFDSKYINAVKVGDTYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25979; Mature: 25979

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKILMGLFLSLLSLEAGEKVYAIFNVKAVQDSKLTLDSTGIVDSIKVTEGSVVKKGDV
CHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCCCEEEEEECCCCEEECCCE
LLLLYNQDKQAQSDSTEQQLIFAKKQYQRYSKIGGAVDRNTLESYEFNYRRLESDYAYSI
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHEECCCCEEEE
ALLNKTILRAPFDGVIASKNIQVGEGVSANSTVLLRLVSHARKLVIEFDSKYINAVKVGD
EEHHHHHHHCCCCCEEECCCEECCCCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECC
TYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK
EEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEEECC
>Mature Secondary Structure
MIRKILMGLFLSLLSLEAGEKVYAIFNVKAVQDSKLTLDSTGIVDSIKVTEGSVVKKGDV
CHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCCCEEEEEECCCCEEECCCE
LLLLYNQDKQAQSDSTEQQLIFAKKQYQRYSKIGGAVDRNTLESYEFNYRRLESDYAYSI
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHEECCCCEEEE
ALLNKTILRAPFDGVIASKNIQVGEGVSANSTVLLRLVSHARKLVIEFDSKYINAVKVGD
EEHHHHHHHCCCCCEEECCCEECCCCCCCCHHHHHHHHHHHHHEEEEECCCEEEEEEECC
TYTYSIDGDSNQHEAKITKIYPTVDENTRKVSAEALLSKPMAVGLFGDGFIQTK
EEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA